RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 KMT5AQ9NQR1 393 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
BEST3-209ENST00000548658 MARCH5Q9NX47 278 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 KLK14Q9P0G3 267 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 TNFSF13BQ9Y275 285 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 HCN4Q9Y3Q4 1203 aa12.53□□□□□ -0.4
BEST3-209ENST00000548658 H0YCG3 227 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 TADA2AO75478 443 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 RECQL4O94761 1208 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 EFEMP2O95967 443 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
BEST3-209ENST00000548658 CNPP09543 421 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 SCP2P22307 547 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 LONP1P36776 959 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 YARSP54577 528 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 DSG1Q02413 1049 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 STRN3Q13033 797 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 KIAA0319Q5VV43 1072 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 SFXN1Q9H9B4 322 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 TOPORSQ9NS56 1045 aaPredicted RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 CHST7Q9NS84 486 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 SNTG2Q9NY99 539 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 ARHGAP28Q9P2N2 729 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.41
BEST3-209ENST00000548658 TDRD15B5MCY1 1934 aaKnown RBP12.52□□□□□ -0.41
BEST3-209ENST00000548658 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 C2CD2LO14523 706 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 PLS3P13797 630 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 EPCAMP16422 314 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 CLCN4P51793 760 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
BEST3-209ENST00000548658 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 FUT10Q6P4F1 479 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 C15orf39Q6ZRI6 1047 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 HDAC7Q8WUI4 952 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 EDAQ92838 391 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 CCDC94Q9BW85 323 aaPredicted RBP12.51□□□□□ -0.41
BEST3-209ENST00000548658 APOL5Q9BWW9 433 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 POLD4Q9HCU8 107 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 MUTYHQ9UIF7 546 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 SF3B1O75533 1304 aaKnown RBP eCLIP12.51□□□□□ -0.41
BEST3-209ENST00000548658 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
BEST3-209ENST00000548658 VPS37CA5D8V6 355 aaPredicted RBP12.5□□□□□ -0.41
BEST3-209ENST00000548658 TEX28O15482 410 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 GLUD1P00367 558 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 PLA2G4BP0C869 781 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 ABCD1P33897 745 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 MAPK7Q13164 816 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
BEST3-209ENST00000548658 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
BEST3-209ENST00000548658 EEF1DP3Q658K8 133 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 DAW1Q8N136 415 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 RASSF8Q8NHQ8 419 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 UROC1Q96N76 676 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 PNMA5Q96PV4 448 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 ACO2Q99798 780 aaKnown RBP12.5□□□□□ -0.41
BEST3-209ENST00000548658 GPR62Q9BZJ7 368 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 PTPRHQ9HD43 1115 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 FNIP2Q9P278 1114 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
BEST3-209ENST00000548658 FAM86C2PA6NEL3 165 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 SFI1A8K8P3 1242 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 PTGESO14684 152 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 SLC16A4O15374 487 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TRAPPC3O43617 180 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TOM1L1O75674 476 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 BRD1O95696 1058 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 MCF2P10911 925 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
BEST3-209ENST00000548658 CD44P16070 742 aaKnown RBP12.49□□□□□ -0.41
BEST3-209ENST00000548658 GRM5P41594 1212 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 ZNF568Q3ZCX4 644 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TMEM119Q4V9L6 283 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 DCLRE1AQ6PJP8 1040 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TMC5Q6UXY8 1006 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 GPR149Q86SP6 731 aa12.49□□□□□ -0.41
BEST3-209ENST00000548658 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
BEST3-209ENST00000548658 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
BEST3-209ENST00000548658 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms