RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 TRAF7Q6Q0C0 670 aa18.91■□□□□ 0.62
LETMD1-215ENST00000548390 SLC35C1Q96A29 364 aa18.91■□□□□ 0.62
LETMD1-215ENST00000548390 TRIM6Q9C030 488 aaPredicted RBP18.91■□□□□ 0.62
LETMD1-215ENST00000548390 GTPBP10A4D1E9 387 aaKnown RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 PMM2O15305 246 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 P4HA2O15460 535 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 IL18RAPO95256 599 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 GHRP10912 638 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 ZSCAN20P17040 1043 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 ACOT2P49753 483 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 AP3M2P53677 418 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 CETN1Q12798 172 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 KCNH2Q12809 1159 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 CRELD2Q6UXH1 353 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 HACE1Q8IYU2 909 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 PDLIM2Q96JY6 352 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 FNBP1Q96RU3 617 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 CCDC94Q9BW85 323 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 TRAIPQ9BWF2 469 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 RPF1Q9H9Y2 349 aaKnown RBP18.9■□□□□ 0.62
LETMD1-215ENST00000548390 PADI3Q9ULW8 664 aa18.9■□□□□ 0.62
LETMD1-215ENST00000548390 GOLGA6L6A8MZA4 724 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 NPTXRO95502 500 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 SKIP12755 728 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 RAB27AP51159 221 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 CLDN10P78369 228 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 VSTM4Q8IW00 320 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 CD302Q8IX05 232 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 THNSL1Q8IYQ7 743 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 ZSWIM2Q8NEG5 633 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 IQCDQ96DY2 449 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 ACAP3Q96P50 834 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 ERGIC2Q96RQ1 377 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 HIPK3Q9H422 1215 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 INTS13Q9NVM9 706 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 ATP11BQ9Y2G3 1177 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 ITIH6Q6UXX5 1313 aa18.89■□□□□ 0.61
LETMD1-215ENST00000548390 CLTBP09497 229 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 STAG3L1P0CL83 205 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 CD52P31358 61 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 TWF2Q6IBS0 349 aaKnown RBP18.88■□□□□ 0.61
LETMD1-215ENST00000548390 CDR2LQ86X02 465 aaPredicted RBP18.88■□□□□ 0.61
LETMD1-215ENST00000548390 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 TSPAN18Q96SJ8 248 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 FTHL17Q9BXU8 183 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 ASB7Q9H672 318 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 AGO3Q9H9G7 860 aaKnown RBP18.88■□□□□ 0.61
LETMD1-215ENST00000548390 PLEKHA5Q9HAU0 1116 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
LETMD1-215ENST00000548390 TEX33O43247 280 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 PBX1P40424 430 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 FMO5P49326 533 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 YARSP54577 528 aaKnown RBP18.87■□□□□ 0.61
LETMD1-215ENST00000548390 TRIM14Q14142 442 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 ZBTB41Q5SVQ8 909 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 UBXN11Q5T124 520 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 UBE2Q1Q7Z7E8 422 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 NT5DC4Q86YG4 428 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 WDR49Q8IV35 697 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 APBB2Q92870 758 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 CCDC127Q96BQ5 260 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 PPP1R9BQ96SB3 815 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 CGRRF1Q99675 332 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 NUP58Q9BVL2 599 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 TOPORSQ9NS56 1045 aaPredicted RBP18.87■□□□□ 0.61
LETMD1-215ENST00000548390 TMEM39AQ9NV64 488 aa18.87■□□□□ 0.61
LETMD1-215ENST00000548390 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.61
LETMD1-215ENST00000548390 LRRIQ3A6PVS8 624 aaPredicted RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 TRIM49P0CI25 452 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 TRIM49CP0CI26 452 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 DLATP10515 647 aaKnown RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 RFC2P35250 354 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 TNFSF9P41273 254 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 DSC3Q14574 896 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 ENOX2Q16206 610 aaKnown RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 KRT39Q6A163 491 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 GBP6Q6ZN66 633 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 EIF2AQ9BY44 585 aaKnown RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 IFIH1Q9BYX4 1025 aaKnown RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 TMEM8AQ9HCN3 771 aa18.86■□□□□ 0.61
LETMD1-215ENST00000548390 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
LETMD1-215ENST00000548390 ZNF623O75123 536 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 TNNI1P19237 187 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 MXI1P50539 228 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 MYL7Q01449 175 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 MBTPS1Q14703 1052 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 SEZ6Q53EL9 994 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 C1orf220Q5T0J3 134 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 CEP120Q8N960 986 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 PLEKHO2Q8TD55 490 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 SEPT8Q92599 483 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
LETMD1-215ENST00000548390 FAM105AQ9NUU6 356 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms