RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 USP49Q70CQ1 688 aa25.41■■□□□ 1.66
CACNB3-208ENST00000548279 C12orf76Q8N812 135 aaPredicted RBP25.41■■□□□ 1.66
CACNB3-208ENST00000548279 B3GALT6Q96L58 329 aa25.41■■□□□ 1.66
CACNB3-208ENST00000548279 POP1Q99575 1024 aaKnown RBP25.41■■□□□ 1.66
CACNB3-208ENST00000548279 NTPCRQ9BSD7 190 aaKnown RBP25.41■■□□□ 1.66
CACNB3-208ENST00000548279 GPR62Q9BZJ7 368 aa25.41■■□□□ 1.66
CACNB3-208ENST00000548279 C17orf75Q9HAS0 396 aa25.41■■□□□ 1.66
CACNB3-208ENST00000548279 TRIP11Q15643 1979 aa25.41■■□□□ 1.66
CACNB3-208ENST00000548279 PLXNA3P51805 1871 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 FAM86C2PA6NEL3 165 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 CASTOR2A6NHX0 329 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 ABLIM1O14639 778 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 SLC26A4O43511 780 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 PLS3P13797 630 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 HOXB8P17481 243 aaPredicted RBP25.4■■□□□ 1.66
CACNB3-208ENST00000548279 TMEM161BQ8NDZ6 487 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 CALML4Q96GE6 196 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 COLEC11Q9BWP8 271 aa25.4■■□□□ 1.66
CACNB3-208ENST00000548279 PHF7Q9BWX1 381 aaPredicted RBP25.4■■□□□ 1.66
CACNB3-208ENST00000548279 MRPL17Q9NRX2 175 aaKnown RBP25.4■■□□□ 1.66
CACNB3-208ENST00000548279 FBXO2Q9UK22 296 aaPredicted RBP25.4■■□□□ 1.66
CACNB3-208ENST00000548279 RBM19Q9Y4C8 960 aaKnown RBP25.4■■□□□ 1.66
CACNB3-208ENST00000548279 LOC730098B7Z3J9 87 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 URODP06132 367 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 WEE2P0C1S8 567 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 PROZP22891 400 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 CEBPZQ03701 1054 aaKnown RBP25.39■■□□□ 1.66
CACNB3-208ENST00000548279 TUSC3Q13454 348 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 DHX8Q14562 1220 aaKnown RBP25.39■■□□□ 1.66
CACNB3-208ENST00000548279 MCM6Q14566 821 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 CBX2Q14781 532 aaPredicted RBP25.39■■□□□ 1.66
CACNB3-208ENST00000548279 GLRA4Q5JXX5 417 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 KIAA0319Q5VV43 1072 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 FUT10Q6P4F1 479 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 GPBP1Q86WP2 473 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 TMEM87AQ8NBN3 555 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 SPIRE2Q8WWL2 714 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 SNX21Q969T3 373 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 EPSTI1Q96J88 318 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 ZBTB45Q96K62 511 aaPredicted RBP25.39■■□□□ 1.66
CACNB3-208ENST00000548279 REEP2Q9BRK0 252 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 C1QTNF1Q9BXJ1 281 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 MRPL4Q9BYD3 311 aaKnown RBP25.39■■□□□ 1.66
CACNB3-208ENST00000548279 KCND2Q9NZV8 630 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 STK39Q9UEW8 545 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 ADAM28Q9UKQ2 775 aa25.39■■□□□ 1.66
CACNB3-208ENST00000548279 NR1I2O75469 434 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 THP07101 528 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 IGFBP6P24592 240 aaPredicted RBP25.38■■□□□ 1.65
CACNB3-208ENST00000548279 GLUD2P49448 558 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 CLCN4P51793 760 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 HSP90AA2PQ14568 343 aaPredicted RBP25.38■■□□□ 1.65
CACNB3-208ENST00000548279 ZNF568Q3ZCX4 644 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 RARS2Q5T160 578 aaKnown RBP25.38■■□□□ 1.65
CACNB3-208ENST00000548279 ZBTB33Q86T24 672 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 RNF135Q8IUD6 432 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 HASPINQ8TF76 798 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 USP28Q96RU2 1077 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 CHST7Q9NS84 486 aa25.38■■□□□ 1.65
CACNB3-208ENST00000548279 MYH15Q9Y2K3 1946 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 STX6O43752 255 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 KIF4AO95239 1232 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 MAPTP10636 758 aaKnown RBP25.37■■□□□ 1.65
CACNB3-208ENST00000548279 KLRC2P26717 231 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 GRM5P41594 1212 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 OSTNP61366 133 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 DSG1Q02413 1049 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 TPRNQ4KMQ1 711 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 RAD54LQ92698 747 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 RPGRIP1Q96KN7 1286 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 CLIC6Q96NY7 704 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 LRFN3Q9BTN0 628 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 EMILIN2Q9BXX0 1053 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 CCSER1Q9C0I3 900 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 ADAM7Q9H2U9 754 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 RAPGEFL1Q9UHV5 662 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 MUTYHQ9UIF7 546 aa25.37■■□□□ 1.65
CACNB3-208ENST00000548279 TEX28O15482 410 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 MEFVO15553 781 aaPredicted RBP25.36■■□□□ 1.65
CACNB3-208ENST00000548279 DCXO43602 365 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 NCKAP1LP55160 1127 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 PPP1R10Q96QC0 940 aaKnown RBP25.36■■□□□ 1.65
CACNB3-208ENST00000548279 POMKQ9H5K3 350 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 RXFP1Q9HBX9 757 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 DZANK1Q9NVP4 752 aa25.36■■□□□ 1.65
CACNB3-208ENST00000548279 SRPRBQ9Y5M8 271 aaKnown RBP25.36■■□□□ 1.65
CACNB3-208ENST00000548279 SP100P23497 879 aaPredicted RBP25.35■■□□□ 1.65
CACNB3-208ENST00000548279 MPZL3Q6UWV2 235 aa25.35■■□□□ 1.65
CACNB3-208ENST00000548279 PPFIBP1Q86W92 1011 aa25.35■■□□□ 1.65
CACNB3-208ENST00000548279 FBXL18Q96ME1 805 aa25.35■■□□□ 1.65
CACNB3-208ENST00000548279 GOLGA2P5Q9HBQ8 144 aa25.35■■□□□ 1.65
CACNB3-208ENST00000548279 ODF2LQ9ULJ1 636 aa25.35■■□□□ 1.65
CACNB3-208ENST00000548279 VWA8A3KMH1 1905 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 TADA2AO75478 443 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 BRD1O95696 1058 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 MCF2P10911 925 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 HARSP12081 509 aaKnown RBP25.34■■□□□ 1.65
CACNB3-208ENST00000548279 COL9A1P20849 921 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 ITIH3Q06033 890 aa25.34■■□□□ 1.65
CACNB3-208ENST00000548279 TMEM31Q5JXX7 168 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms