RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CABP7Q86V35 215 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 ZBTB8OSQ8IWT0 167 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 COLGALT2Q8IYK4 626 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 HACE1Q8IYU2 909 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MCPH1Q8NEM0 835 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 SLC22A17Q8WUG5 538 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 CCDC51Q96ER9 411 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MFSD14AQ96MC6 490 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 RIPOR3Q96MK2 946 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 KLHL5Q96PQ7 755 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM175Q9BSA9 504 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 COLEC11Q9BWP8 271 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 NXF3Q9H4D5 531 aaKnown RBP7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MRPL17Q9NRX2 175 aaKnown RBP7.42□□□□□ -1.22
SCAF11-211ENST00000547950 LRWD1Q9UFC0 647 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 NOL7Q9UMY1 257 aaKnown RBP7.42□□□□□ -1.22
SCAF11-211ENST00000547950 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 USP20Q9Y2K6 914 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 PCDHB3Q9Y5E6 796 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MYO7AQ13402 2215 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM221A6NGB7 291 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 F8W810 466 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 M0R296 226 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 LILRB3O75022 631 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 GGCXP38435 758 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 MTHFRP42898 656 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 TRAPPC10P48553 1259 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 TOB1P50616 345 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-211ENST00000547950 ORC2Q13416 577 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-211ENST00000547950 PRPF4BQ13523 1007 aaKnown RBP7.41□□□□□ -1.22
SCAF11-211ENST00000547950 PDIA5Q14554 519 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 ECM1Q16610 540 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 C4orf32Q8N8J7 132 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 DEPTORQ8TB45 409 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 BSNDQ8WZ55 320 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 B3GALT6Q96L58 329 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 NECTIN4Q96NY8 510 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 NFKBIZQ9BYH8 718 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 BHMT2Q9H2M3 363 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 FZD8Q9H461 694 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 POMKQ9H5K3 350 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 DDX19AQ9NUU7 478 aaKnown RBP7.41□□□□□ -1.22
SCAF11-211ENST00000547950 PRMT7Q9NVM4 692 aaPredicted RBP7.41□□□□□ -1.22
SCAF11-211ENST00000547950 DZANK1Q9NVP4 752 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 MARCH5Q9NX47 278 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 STK39Q9UEW8 545 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 LIMD1Q9UGP4 676 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 NR2E1Q9Y466 385 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 PCDHB6Q9Y5E3 794 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 IRAK3Q9Y616 596 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 ADGRG1Q9Y653 693 aa7.41□□□□□ -1.22
SCAF11-211ENST00000547950 BRWD1Q9NSI6 2320 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 NCOR1O75376 2440 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 RCCD1A6NED2 376 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 CCDC169A6NNP5 214 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 PP2D1A8MPX8 630 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 C2CD4DB7Z1M9 353 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 ACKR2O00590 384 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 TEX28O15482 410 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 TADA2AO75478 443 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SOD2P04179 222 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 URODP06132 367 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SPATA31D3P0C874 917 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 U2AF2P26368 475 aaKnown RBP eCLIP7.4□□□□□ -1.226e-7■■□□□ 12.3
SCAF11-211ENST00000547950 CDC25AP30304 524 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 CLCN4P51793 760 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 DSC1Q08554 894 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 LAPTM4AQ15012 233 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 RABEP1Q15276 862 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 ZRSR1Q15695 479 aaKnown RBP7.4□□□□□ -1.22
SCAF11-211ENST00000547950 MAPK6Q16659 721 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 PTPN21Q16825 1174 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 KIAA0319Q5VV43 1072 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 HAUS3Q68CZ6 603 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 BLOC1S3Q6QNY0 202 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 DTHD1Q6ZMT9 781 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SPATA31D4Q6ZUB0 917 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 PALB2Q86YC2 1186 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 KREMEN2Q8NCW0 462 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 GSTCDQ8NEC7 633 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 FEZF2Q8TBJ5 459 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SNX29Q8TEQ0 813 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 IFT74Q96LB3 600 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 RPS6KC1Q96S38 1066 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 KIFC3Q9BVG8 833 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 PRR14Q9BWN1 585 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 GPR62Q9BZJ7 368 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 C2orf40Q9H1Z8 148 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 PDZD7Q9H5P4 517 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SNTG2Q9NY99 539 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 DNM3Q9UQ16 869 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 SSX2IPQ9Y2D8 614 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 GDAQ9Y2T3 454 aa7.4□□□□□ -1.22
SCAF11-211ENST00000547950 RALGAPA2Q2PPJ7 1873 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms