RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 KCNH3Q9ULD8 1083 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 COG5Q9UP83 839 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 TCHHQ07283 1943 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 FRMD3A2A2Y4 597 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 PTGESO14684 152 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 HARSP12081 509 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 CMA1P23946 247 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 OR1G1P47890 313 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 OSTNP61366 133 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 HYAL1Q12794 435 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 HERC4Q5GLZ8 1057 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 TCF25Q9BQ70 676 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 CCDC94Q9BW85 323 aaPredicted RBP20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 PANK4Q9NVE7 773 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 BRWD1Q9NSI6 2320 aa20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 TDRD15B5MCY1 1934 aaKnown RBP20.51■□□□□ 0.87
PRPF40B-206ENST00000547764 HNRNPDLO14979 420 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 CLDN3O15551 220 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 PIGRP01833 764 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 ABCD1P33897 745 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.872e-15■■■■■ 55.4
PRPF40B-206ENST00000547764 LIG4P49917 911 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 AMPD3Q01432 767 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 TFF2Q03403 129 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 MCL1Q07820 350 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 NOLC1Q14978 699 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 PLPP4Q5VZY2 271 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 DDX53Q86TM3 631 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 ATXN2LQ8WWM7 1075 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 PPP2R3CQ969Q6 453 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 TRIM9Q9C026 710 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 HAPLN2Q9GZV7 340 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 MRPL44Q9H9J2 332 aaKnown RBP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 ENTPD7Q9NQZ7 604 aa20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 PRG3Q9Y2Y8 225 aaPredicted RBP20.5■□□□□ 0.87
PRPF40B-206ENST00000547764 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 A0A1B0GVL5 298 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 THP07101 528 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 MATR3P43243 847 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 YARSP54577 528 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 COL19A1Q14993 1142 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 TMC7Q7Z402 723 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 RBM23Q86U06 439 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 MAP4K3Q8IVH8 894 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 ACAP3Q96P50 834 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 PYM1Q9BRP8 204 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 STRA6Q9BX79 667 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 VN1R3Q9BXE9 311 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 IGFLR1Q9H665 355 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 UBE2ZQ9H832 354 aaPredicted RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 MAGEF1Q9HAY2 307 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 NGRNQ9NPE2 291 aaKnown RBP20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 OLFML3Q9NRN5 406 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 MARCH5Q9NX47 278 aa20.49■□□□□ 0.87
PRPF40B-206ENST00000547764 XIRP2A4UGR9 3374 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 NCK2O43639 380 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 NR1I2O75469 434 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 PPP1R37O75864 691 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 PFKFB1P16118 471 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 NRIP1P48552 1158 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 MRPS5P82675 430 aaKnown RBP20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 TUSC3Q13454 348 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 NAB2Q15742 525 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 SEZ6Q53EL9 994 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 GLRA4Q5JXX5 417 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 CNNM4Q6P4Q7 775 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 SLC39A4Q6P5W5 647 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 ALKAL1Q6UXT8 129 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 CCDC65Q8IXS2 484 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 PABPC5Q96DU9 382 aaKnown RBP20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 C7orf25Q9BPX7 421 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 ZBP1Q9H171 429 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 TLE6Q9H808 572 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 TOPORSQ9NS56 1045 aaPredicted RBP20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 CACNG4Q9UBN1 327 aa20.48■□□□□ 0.87
PRPF40B-206ENST00000547764 A0A0C4DFX4 3053 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 HIDE1A8MVS5 230 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 F8W810 466 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 PER2O15055 1255 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 CASP5P51878 434 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 ASIC1P78348 528 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 COASYQ13057 564 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 CTC1Q2NKJ3 1217 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 XKR4Q5GH76 650 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 EP400NLQ6ZTU2 488 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 MRPL43Q8N983 215 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 RABGGTAQ92696 567 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 HVCN1Q96D96 273 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 ASB2Q96Q27 587 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 PPP1R10Q96QC0 940 aaKnown RBP20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 PAAF1Q9BRP4 392 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 FGFBP2Q9BYJ0 223 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 CLDND1Q9NY35 253 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 SERTAD1Q9UHV2 236 aa20.47■□□□□ 0.87
PRPF40B-206ENST00000547764 HPSEQ9Y251 543 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms