RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 C1QL3Q5VWW1 255 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 MBNL2Q5VZF2 373 aaKnown RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 MFSD5Q6N075 450 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 C11orf74Q86VG3 221 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ELOA2Q8IYF1 753 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ZNF610Q8N9Z0 462 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 PROKR1Q8TCW9 393 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 UBE2Q2Q8WVN8 375 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ATXN2LQ8WWM7 1075 aaKnown RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 LENG9Q96B70 501 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 SLC39A13Q96H72 371 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 OSBPL6Q9BZF3 934 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 PCIF1Q9H4Z3 704 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 THG1LQ9NWX6 298 aaKnown RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 OBP2AQ9NY56 170 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 TNKSO95271 1327 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 PRPF3O43395 683 aaKnown RBP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 MFAP3LO75121 409 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 ABHD16AO95870 558 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 LMNAP02545 664 aaKnown RBP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 HNRNPLP14866 589 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 IL12RB1P42701 662 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 ID4P47928 161 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 RABGGTBP53611 331 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 OCRLQ01968 901 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 ADCY2Q08462 1091 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 FAPQ12884 760 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 GRAMD1BQ3KR37 738 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 KCNV1Q6PIU1 500 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 HTR3DQ70Z44 454 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 VRK3Q8IV63 474 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 GPR150Q8NGU9 434 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 TUBGCP5Q96RT8 1024 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 MTG2Q9H4K7 406 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 POLR3BQ9NW08 1133 aaPredicted RBP5.33□□□□□ -1.56
SCAF11-210ENST00000547654 TERF2IPQ9NYB0 399 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 PTGFRNQ9P2B2 879 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 NCDNQ9UBB6 729 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 USP25Q9UHP3 1055 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 ZNHIT2Q9UHR6 403 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 PACSIN3Q9UKS6 424 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 INTUQ9ULD6 942 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 ZKSCAN5Q9Y2L8 839 aa5.33□□□□□ -1.56
SCAF11-210ENST00000547654 WASHC2AQ641Q2 1341 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 MTSS1O43312 755 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 ULK1O75385 1050 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PRKD3O94806 890 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 VSIG10L2P0DP72 767 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PF4V1P10720 104 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 TRIM27P14373 513 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PROZP22891 400 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 RAPGEF1Q13905 1077 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 ATP13A4Q4VNC1 1196 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 HDGFL2Q7Z4V5 671 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-210ENST00000547654 ZZZ3Q8IYH5 903 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PIK3C3Q8NEB9 887 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 DYDC2Q96IM9 177 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 MNTQ99583 582 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 MLST8Q9BVC4 326 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 EMC7Q9NPA0 242 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 USP36Q9P275 1121 aaKnown RBP5.32□□□□□ -1.56
SCAF11-210ENST00000547654 TRPS1Q9UHF7 1281 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PNMA8BQ9ULN7 279 aaPredicted RBP5.32□□□□□ -1.56
SCAF11-210ENST00000547654 RB1CC1Q8TDY2 1594 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 PCSK5Q92824 1860 aa5.32□□□□□ -1.56
SCAF11-210ENST00000547654 CC2D2AQ9P2K1 1620 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 XDHP47989 1333 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 MYPNQ86TC9 1320 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PRSS38A1L453 326 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 TOX4O94842 621 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 FKBP9O95302 570 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 MT-CO1P00395 513 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 ITGB1P05556 798 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 GAAP10253 952 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 MANFP55145 182 aaKnown RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 MORC3Q14149 939 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PDCD1Q15116 288 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PRAMEF9Q5VWM5 478 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 LRRC55Q6ZSA7 311 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 RHOUQ7L0Q8 258 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PNMA8AQ86V59 439 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PLA2G15Q8NCC3 412 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 ZNF764Q96H86 408 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 WDR92Q96MX6 357 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 FAM193BQ96PV7 902 aaPredicted RBP5.31□□□□□ -1.56
SCAF11-210ENST00000547654 MAF1Q9H063 256 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 PNMA2Q9UL42 364 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 ANKRD6Q9Y2G4 727 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 CUX2O14529 1486 aa5.31□□□□□ -1.56
SCAF11-210ENST00000547654 GRXCR1A8MXD5 290 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms