RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RSPH14Q9UHP6 348 aa16.7■□□□□ 0.26
BRF1-212ENST00000547562 NFS1Q9Y697 457 aa16.7■□□□□ 0.26
BRF1-212ENST00000547562 HMGB1P1B2RPK0 211 aaPredicted RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 CYP1A2P05177 515 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 COPB2P35606 906 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 MARCKSL1P49006 195 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 MTMR3Q13615 1198 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 GNPTABQ3T906 1256 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 AADACL2Q6P093 401 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 TMC3Q7Z5M5 1100 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 APOBEC3FQ8IUX4 373 aaKnown RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 BICD1Q96G01 975 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 POLR3FQ9H1D9 316 aaPredicted RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 TMBIM4Q9HC24 238 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 GTF3C4Q9UKN8 822 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 TRPC6Q9Y210 931 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 GOLGA6L10A6NI86 522 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 HSPA6P17066 643 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 CTNNA1P35221 906 aaKnown RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 PEX5P50542 639 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 DHX34Q14147 1143 aaKnown RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 MIS18BP1Q6P0N0 1132 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 ZNF564Q8TBZ8 553 aaPredicted RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 ATP8B4Q8TF62 1192 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 DDX1Q92499 740 aaKnown RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 CD101Q93033 1021 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 TATDN2Q93075 761 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 FAM213AQ9BRX8 229 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 NUP85Q9BW27 656 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
BRF1-212ENST00000547562 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 RRP15Q9Y3B9 282 aaKnown RBP16.69■□□□□ 0.26
BRF1-212ENST00000547562 FAM187AA6NFU0 413 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 H0YCG3 227 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 NR1D1P20393 614 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 ABCD1P33897 745 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 GCNT1Q02742 428 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 XKR3Q5GH77 459 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 DUPD1Q68J44 220 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 TTC19Q6DKK2 380 aaPredicted RBP16.68■□□□□ 0.26
BRF1-212ENST00000547562 DHX38Q92620 1227 aaKnown RBP16.68■□□□□ 0.26
BRF1-212ENST00000547562 ZNF653Q96CK0 615 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 ERP44Q9BS26 406 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.26
BRF1-212ENST00000547562 LCMT1Q9UIC8 334 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 SORBS3O60504 671 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 SUPT20HL2P0C7V6 817 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 ATP1A2P50993 1020 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 UBLCP1Q8WVY7 318 aaPredicted RBP16.68■□□□□ 0.26
BRF1-212ENST00000547562 ELMO3Q96BJ8 720 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 TRIM31Q9BZY9 425 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 UVRAGQ9P2Y5 699 aa16.68■□□□□ 0.26
BRF1-212ENST00000547562 SPDYE16A6NNV3 312 aaPredicted RBP16.67■□□□□ 0.26
BRF1-212ENST00000547562 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 PHF2O75151 1096 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
BRF1-212ENST00000547562 MYZAPP0CAP1 466 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 ZNF844Q08AG5 666 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 PDCLQ13371 301 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 MTERF2Q49AM1 385 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 C15orf39Q6ZRI6 1047 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 ENOSF1Q7L5Y1 443 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 OR2W6PQ8NHA6 318 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 GLG1Q92896 1179 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 MAF1Q9H063 256 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 HOXC10Q9NYD6 342 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 SIP14410 1827 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 GGPS1O95749 300 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 CTNNA2P26232 953 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 DHX9Q08211 1270 aaKnown RBP16.67■□□□□ 0.26
BRF1-212ENST00000547562 EMC2Q15006 297 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 SEL1L2Q5TEA6 688 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 JAMLQ86YT9 394 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 BCAS4Q8TDM0 211 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 FMO2Q99518 471 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 PI4K2AQ9BTU6 479 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 KIAA1586Q9HCI6 787 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
BRF1-212ENST00000547562 EXTL3O43909 919 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 KRT5P13647 590 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 CHRNA3P32297 505 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 LIG4P49917 911 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 CLDN10P78369 228 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 SP2Q02086 613 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 PRELID2Q8N945 189 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 C18orf8Q96DM3 657 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 BTBD6Q96KE9 485 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 KCNG1Q9UIX4 513 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 MYPNQ86TC9 1320 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 MYO1CO00159 1063 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 SPOPO43791 374 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 PYGMP11217 842 aa16.66■□□□□ 0.26
BRF1-212ENST00000547562 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms