RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 TOPORSQ9NS56 1045 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 RBAKQ9NYW8 714 aaPredicted RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 CPSF3Q9UKF6 684 aaKnown RBP17.22■□□□□ 0.35
TRAFD1-203ENST00000547063 PES1O00541 588 aaKnown RBP17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 FAM189A1O60320 539 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 N4BP1O75113 896 aaKnown RBP17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 IL18RAPO95256 599 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 MBTPS1Q14703 1052 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 PSMD6Q15008 389 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 FKBP15Q5T1M5 1219 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 TCERG1LQ5VWI1 586 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 BRSK2Q8IWQ3 736 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 ACAP3Q96P50 834 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 FNBP1Q96RU3 617 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 PLEKHA5Q9HAU0 1116 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 TAB2Q9NYJ8 693 aa17.21■□□□□ 0.35
TRAFD1-203ENST00000547063 A0A1B0GTH6 734 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 TIMP1P01033 207 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 CXCL10P02778 98 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 STAG3L1P0CL83 205 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 RAG1P15918 1043 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 AP3M2P53677 418 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 DSC3Q14574 896 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 PLEKHG4Q58EX7 1191 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 DCAF17Q5H9S7 520 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 SLC35C1Q96A29 364 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 TSPAN18Q96SJ8 248 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 VPS16Q9H269 839 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 FAM105AQ9NUU6 356 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
TRAFD1-203ENST00000547063 LGALS16A8MUM7 142 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 NBNO60934 754 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 ZNF623O75123 536 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 ADRB2P07550 413 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 GTF2H1P32780 548 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 CYP2C18P33260 490 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 CCL23P55773 120 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 CETN1Q12798 172 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 KCNH2Q12809 1159 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 UBXN11Q5T124 520 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 APTXQ7Z2E3 356 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 PGBD4Q96DM1 585 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 MRFAP1L1Q96HT8 127 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 ADAM2Q99965 735 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 EIF2AQ9BY44 585 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 WNT8AQ9H1J5 351 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 ASB7Q9H672 318 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 PCDHB2Q9Y5E7 798 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
TRAFD1-203ENST00000547063 A0A0U1RQF3 1178 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 P4HA2O15460 535 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 PFKMP08237 780 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 TNFSF9P41273 254 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 OSTNP61366 133 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 MFSD5Q6N075 450 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 SLC24A5Q71RS6 500 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 RPUSD2Q8IZ73 545 aaKnown RBP17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 XPO4Q9C0E2 1151 aaKnown RBP17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 TMX1Q9H3N1 280 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 UBN1Q9NPG3 1134 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 RGS18Q9NS28 235 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 IPPQ9Y573 584 aa17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.18■□□□□ 0.34
TRAFD1-203ENST00000547063 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 CITO14578 2027 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 PMM2O15305 246 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 ADCY5O95622 1261 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 DLATP10515 647 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 ITGA4P13612 1032 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 TNNI1P19237 187 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 ZNF75DP51815 510 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 CLDN10P78369 228 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 UBXN1Q04323 297 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 NR1I3Q14994 352 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 CEP120Q8N960 986 aa17.17■□□□□ 0.34
TRAFD1-203ENST00000547063 DBF4BQ8NFT6 615 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms