RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
CPNE8-204ENST00000546603 DMRT3Q9NQL9 472 aa7.7□□□□□ -1.18
CPNE8-204ENST00000546603 POGKQ9P215 609 aa7.7□□□□□ -1.18
CPNE8-204ENST00000546603 RBP3P10745 1247 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 IL2RBP14784 551 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 SREBF1P36956 1147 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 AMPD3Q01432 767 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 KLF10Q13118 480 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 FHL2Q14192 279 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 CLUL1Q15846 466 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 SYDE2Q5VT97 1194 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 SYNE4Q8N205 404 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 AMER2Q8N7J2 671 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPNE8-204ENST00000546603 OR10H5Q8NGA6 315 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 HOXB13Q92826 284 aaPredicted RBP7.69□□□□□ -1.18
CPNE8-204ENST00000546603 CLIP3Q96DZ5 547 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 NRDE2Q9H7Z3 1164 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 MKS1Q9NXB0 559 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 MOCS1Q9NZB8 636 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 GPRC5BQ9NZH0 403 aa7.69□□□□□ -1.18
CPNE8-204ENST00000546603 FAM171A2A8MVW0 826 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 ALG1L2C9J202 215 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 SNRPA1P09661 255 aaKnown RBP7.68□□□□□ -1.18
CPNE8-204ENST00000546603 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
CPNE8-204ENST00000546603 APOBEC3AP31941 199 aaPredicted RBP7.68□□□□□ -1.18
CPNE8-204ENST00000546603 CLRN1P58418 232 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 MGAT2Q10469 447 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 LENG9Q96B70 501 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 CYFIP2Q96F07 1278 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 MRIQ9BWK5 157 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 LANCL2Q9NS86 450 aa7.68□□□□□ -1.18
CPNE8-204ENST00000546603 RPS6KA4O75676 772 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 CDKN1CP49918 316 aaPredicted RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 HMGA2P52926 109 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 NHLH2Q02577 135 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 ITKQ08881 620 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 CSRP2Q16527 193 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 RRP12Q5JTH9 1297 aaKnown RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 CBARPQ8N350 705 aaPredicted RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 PRPF38AQ8NAV1 312 aaKnown RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 C1orf162Q8NEQ5 155 aaPredicted RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 SLC35B2Q8TB61 432 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 NEU4Q8WWR8 484 aaPredicted RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 SLC2A13Q96QE2 648 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 SLC46A2Q9BY10 475 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 SENP6Q9GZR1 1112 aaPredicted RBP7.67□□□□□ -1.18
CPNE8-204ENST00000546603 FZD1Q9UP38 647 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 DNM3Q9UQ16 869 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 ATRNL1Q5VV63 1379 aa7.67□□□□□ -1.18
CPNE8-204ENST00000546603 CXorf49A8MYA2 514 aaPredicted RBP7.66□□□□□ -1.18
CPNE8-204ENST00000546603 AHRRA9YTQ3 701 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 LEFTY2O00292 366 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 IARSP41252 1262 aaKnown RBP7.66□□□□□ -1.18
CPNE8-204ENST00000546603 ATXN7L2Q5T6C5 722 aaPredicted RBP7.66□□□□□ -1.18
CPNE8-204ENST00000546603 GDF7Q7Z4P5 450 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 SYT12Q8IV01 421 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 ZCRB1Q8TBF4 217 aaKnown RBP7.66□□□□□ -1.18
CPNE8-204ENST00000546603 FAXDC2Q96IV6 333 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 TMEM140Q9NV12 185 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 TRPM5Q9NZQ8 1165 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 ING1Q9UK53 422 aaPredicted RBP7.66□□□□□ -1.18
CPNE8-204ENST00000546603 TRHDEQ9UKU6 1024 aa7.66□□□□□ -1.18
CPNE8-204ENST00000546603 GAGE12BA1L429 117 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 GAGE12HA6NDE8 117 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 TEX33O43247 280 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 GUCY1A2P33402 732 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 TGFB2P61812 414 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 MTMR1Q13613 665 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 MRGPREQ86SM8 312 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 PPM1NQ8N819 430 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 RNF169Q8NCN4 708 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 CASKIN2Q8WXE0 1202 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 MANSC1Q9H8J5 431 aa7.65□□□□□ -1.18
CPNE8-204ENST00000546603 SAP30BPQ9UHR5 308 aaKnown RBP7.65□□□□□ -1.18
CPNE8-204ENST00000546603 KLHL33A6NCF5 533 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 RNASET2O00584 256 aaKnown RBP7.64□□□□□ -1.19
CPNE8-204ENST00000546603 ITGB1P05556 798 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 ZSCAN20P17040 1043 aaPredicted RBP7.64□□□□□ -1.19
CPNE8-204ENST00000546603 LAG3P18627 525 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 NR4A1P22736 598 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 WASP42768 502 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 RNASE9P60153 205 aaKnown RBP7.64□□□□□ -1.19
CPNE8-204ENST00000546603 DPTQ07507 201 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 SEPT2Q15019 361 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 AFMIDQ63HM1 303 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 RHOUQ7L0Q8 258 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 ULK2Q8IYT8 1036 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 STON2Q8WXE9 905 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 LARP4BQ92615 738 aaKnown RBP7.64□□□□□ -1.19
CPNE8-204ENST00000546603 MTMR8Q96EF0 704 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 C7orf25Q9BPX7 421 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 MRI1Q9BV20 369 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 PCDH12Q9NPG4 1184 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 COL4A3BPQ9Y5P4 624 aa7.64□□□□□ -1.19
CPNE8-204ENST00000546603 MRFAP1Q9Y605 127 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms