RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 EPHA7Q15375 998 aa11.06□□□□□ -0.64
SSH1-203ENST00000546433 NUGGCQ68CJ6 796 aa11.06□□□□□ -0.64
SSH1-203ENST00000546433 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
SSH1-203ENST00000546433 ADGRF4Q8IZF3 695 aa11.06□□□□□ -0.64
SSH1-203ENST00000546433 DCLK2Q8N568 766 aa11.06□□□□□ -0.64
SSH1-203ENST00000546433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSH1-203ENST00000546433 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
SSH1-203ENST00000546433 PDE1CQ14123 709 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 DHX34Q14147 1143 aaKnown RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 MAML1Q92585 1016 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 GPR75-ASB3A0A0A6YYF3 556 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 HMGCRP04035 888 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 MARK3P27448 753 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 INPP1P49441 399 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 PMS2P54278 862 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 GFPT1Q06210 699 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 QRICH1Q2TAL8 776 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 USP17L6PQ6QN14 398 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 ZBTB18Q99592 522 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 NUP85Q9BW27 656 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 CAPN11Q9UMQ6 739 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 SLC16A4O15374 487 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 ZFXP17010 805 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 NCF2P19878 526 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 GUCY2CP25092 1073 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 TSPY1Q01534 308 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 CDKL3Q8IVW4 592 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 PDXKO00764 312 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 FARP2O94887 1054 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 EYA4O95677 639 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 CDO1Q16878 200 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 TMEM270Q6UE05 265 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 RHOT1Q8IXI2 618 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 FAM213AQ9BRX8 229 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 KLHL8Q9P2G9 620 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 ASAP2O43150 1006 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 SDC4P31431 198 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 EXOSC10Q01780 885 aaKnown RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 DRAP1Q14919 205 aaPredicted RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 TAF11Q15544 211 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 TWF2Q6IBS0 349 aaKnown RBP11.05□□□□□ -0.64
SSH1-203ENST00000546433 RFFLQ8WZ73 363 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 NRBF2Q96F24 287 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 CCSER1Q9C0I3 900 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 SMARCAD1Q9H4L7 1026 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
SSH1-203ENST00000546433 SLC15A5A6NIM6 579 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 RASA4BC9J798 803 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 RASA4O43374 803 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 LRRC31Q6UY01 552 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 FBXL13Q8NEE6 735 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SUN2Q9UH99 717 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 LIMA1Q9UHB6 759 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 LRP6O75581 1613 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SBK1Q52WX2 424 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 TMTC4Q5T4D3 741 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 ITPRIPL1Q6GPH6 555 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SYDE1Q6ZW31 735 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 ACAD11Q709F0 780 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 KCTD17Q8N5Z5 321 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SNF8Q96H20 258 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 PDLIM2Q96JY6 352 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 APBA2Q99767 749 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 GJB4Q9NTQ9 266 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 TRIM33Q9UPN9 1127 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 APOBEC2Q9Y235 224 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 FAM205AQ6ZU69 1335 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 GNA15P30679 374 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SLC1A1P43005 524 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 ARPP19P56211 112 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 TEDDM1Q5T9Z0 273 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 SHC4Q6S5L8 630 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 CCDC138Q96M89 665 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 EIF2AK1Q9BQI3 630 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 LXNQ9BS40 222 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 POLIQ9UNA4 740 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 FAM208AQ9UK61 1670 aaKnown RBP11.04□□□□□ -0.64
SSH1-203ENST00000546433 ITIH6Q6UXX5 1313 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 GRK4P32298 578 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 EFNA5P52803 228 aa11.04□□□□□ -0.64
SSH1-203ENST00000546433 KRT80Q6KB66 452 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms