RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	NKRF	O15226	690 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TRIM13	O60858	407 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TUSC2	O75896	110 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	UBXN7	O94888	489 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	HRG	P04196	525 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	PDC	P20941	246 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	ENPP1	P22413	925 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	AMPH	P49418	695 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	RENBP	P51606	427 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	GTF2A2	P52657	109 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	PCBP3	P57721	371 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	ALDH6A1	Q02252	535 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CALD1	Q05682	793 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TMEM62	Q0P6H9	643 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	IFIT5	Q13325	482 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	SEMA5A	Q13591	1074 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	SSPN	Q14714	243 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	SLC9A5	Q14940	896 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TMEM132B	Q14DG7	1078 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	RRS1	Q15050	365 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	FSCN1	Q16658	493 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TUBB8	Q3ZCM7	444 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	DARS2	Q6PI48	645 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CCDC174	Q6PII3	467 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CEP68	Q76N32	757 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CXorf67	Q86X51	503 aa	Predicted RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	DENND1C	Q8IV53	801 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	NKAP	Q8N5F7	415 aa	Known RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	EAF2	Q96CJ1	260 aa	Predicted RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	ZNF496	Q96IT1	587 aa	Predicted RBP	4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	SELENOO	Q9BVL4	669 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	B3GNT5	Q9BYG0	378 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	BHMT2	Q9H2M3	363 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	ACSS2	Q9NR19	701 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	TCFL5	Q9UL49	500 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	PCDHGB3	Q9Y5G1	929 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	RPS6KL1	Q9Y6S9	549 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	USP19	O94966	1318 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	MAP3K19	Q56UN5	1328 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CRYBG1	Q9Y4K1	1723 aa		4.18	□□□□□ -1.74
CUL3-215	ENST00000546102	CAMTA1	Q9Y6Y1	1673 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	RASA4B	C9J798	803 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102		H3BML4	177 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102		H7BY64	318 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	RASA4	O43374	803 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	B3GALT2	O43825	422 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	NPHS1	O60500	1241 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	SRGN	P10124	158 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	COL6A1	P12109	1028 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	FPR2	P25090	351 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	IL13	P35225	146 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	ARL4A	P40617	200 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	KIR2DL1	P43626	348 aa	Predicted RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	KIR2DL2	P43627	348 aa	Predicted RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	GALK1	P51570	392 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	TEK	Q02763	1124 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	SPIRE1	Q08AE8	756 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	EIF4A2	Q14240	407 aa	Known RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	UGT8	Q16880	541 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	NPNT	Q6UXI9	565 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	RNF111	Q6ZNA4	994 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	CEP128	Q6ZU80	1094 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	USP45	Q70EL2	814 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	ZZZ3	Q8IYH5	903 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	TCP11L2	Q8N4U5	519 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	USHBP1	Q8N6Y0	703 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	NAT16	Q8N8M0	369 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	SH3RF2	Q8TEC5	729 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	SSH1	Q8WYL5	1049 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	DPF3	Q92784	378 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	COA7	Q96BR5	231 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	C1GALT1C1	Q96EU7	318 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	CDC5L	Q99459	802 aa	Known RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	CD244	Q9BZW8	370 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	TMEM60	Q9H2L4	133 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	SEMA4A	Q9H3S1	761 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	MARCH2	Q9P0N8	246 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	MBD1	Q9UIS9	605 aa	Predicted RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	KCNG1	Q9UIX4	513 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	B3GALT1	Q9Y5Z6	326 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	ABCA3	Q99758	1704 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	ZNF521	Q96K83	1311 aa		4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.17	□□□□□ -1.74
CUL3-215	ENST00000546102	ROBO1	Q9Y6N7	1651 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	OTOL1	A6NHN0	477 aa	Predicted RBP	4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	N4BP3	O15049	544 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	MAFG	O15525	162 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	DTNB	O60941	627 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	USP2	O75604	605 aa	Predicted RBP	4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	TBC1D8	O95759	1140 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	CYP17A1	P05093	508 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	LPL	P06858	475 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	PEX2	P28328	305 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	HOXC9	P31274	260 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	PRKAR2B	P31323	418 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	MAN1A1	P33908	653 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	CHKA	P35790	457 aa		4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	MANF	P55145	182 aa	Known RBP	4.16	□□□□□ -1.74
CUL3-215	ENST00000546102	SIM2	Q14190	667 aa	Predicted RBP	4.16	□□□□□ -1.74

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