RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 EXTL3O43909 919 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 UPP2O95045 317 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 CLTAP09496 248 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 AKAP5P24588 427 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 ERCC5P28715 1186 aaPredicted RBP20.21■□□□□ 0.83
CCDC189-212ENST00000546006 CYP2J2P51589 502 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 STX17P56962 302 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 TTI2Q6NXR4 508 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 AGMOQ6ZNB7 445 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 TMEM192Q8IY95 271 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 GPD1LQ8N335 351 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 XXYLT1Q8NBI6 393 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 ACAP3Q96P50 834 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 UBN1Q9NPG3 1134 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 PARP2Q9UGN5 583 aa20.21■□□□□ 0.83
CCDC189-212ENST00000546006 CPSF3Q9UKF6 684 aaKnown RBP20.21■□□□□ 0.83
CCDC189-212ENST00000546006 GOLGA8IPA6NC78 632 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 GOLGA8JA6NMD2 632 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 RECQL4O94761 1208 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 NR2F2P24468 414 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
CCDC189-212ENST00000546006 TNFSF9P41273 254 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 ACOT2P49753 483 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 CRELD2Q6UXH1 353 aaPredicted RBP20.2■□□□□ 0.82
CCDC189-212ENST00000546006 CHRDL2Q6WN34 429 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 C11orf57Q6ZUT1 292 aaPredicted RBP20.2■□□□□ 0.82
CCDC189-212ENST00000546006 TMCO2Q7Z6W1 182 aaPredicted RBP20.2■□□□□ 0.82
CCDC189-212ENST00000546006 FBXL18Q96ME1 805 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 GZF1Q9H116 711 aaPredicted RBP20.2■□□□□ 0.82
CCDC189-212ENST00000546006 KIAA1586Q9HCI6 787 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 GIT1Q9Y2X7 761 aa20.2■□□□□ 0.82
CCDC189-212ENST00000546006 HOXA2O43364 376 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 EXOC3O60645 756 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 FGFR1P11362 822 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 ATP2A2P16615 1042 aaKnown RBP20.19■□□□□ 0.82
CCDC189-212ENST00000546006 YARSP54577 528 aaKnown RBP20.19■□□□□ 0.82
CCDC189-212ENST00000546006 ADAM9Q13443 819 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 ZC3H3Q8IXZ2 948 aaKnown RBP20.19■□□□□ 0.82
CCDC189-212ENST00000546006 DUSP9Q99956 384 aaKnown RBP20.19■□□□□ 0.82
CCDC189-212ENST00000546006 DNAJC25Q9H1X3 360 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 RSAD1Q9HA92 442 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
CCDC189-212ENST00000546006 FKBP3Q00688 224 aaKnown RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 HSP90AA2PQ14568 343 aaPredicted RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 NOC3LQ8WTT2 800 aaKnown RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 MED15Q96RN5 788 aa20.18■□□□□ 0.82
CCDC189-212ENST00000546006 RPF1Q9H9Y2 349 aaKnown RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 TOPORSQ9NS56 1045 aaPredicted RBP20.18■□□□□ 0.82
CCDC189-212ENST00000546006 ZNF233A6NK53 670 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CETN3O15182 167 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 OFD1O75665 1012 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 DGKIO75912 1065 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 GJB5O95377 273 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CXCL8P10145 99 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 ENOX2Q16206 610 aaKnown RBP20.17■□□□□ 0.82
CCDC189-212ENST00000546006 ANO6Q4KMQ2 910 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CLLU1OSQ5K130 101 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 FAM117BQ6P1L5 589 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 GLB1LQ6UWU2 654 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 LRRC55Q6ZSA7 311 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CBWD2Q8IUF1 395 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 HERC6Q8IVU3 1022 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 TDHQ8IZJ6 230 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 KLK14Q9P0G3 267 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 FRMD4BQ9Y2L6 1034 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 PTPRSQ13332 1948 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 MEFVO15553 781 aaPredicted RBP20.17■□□□□ 0.82
CCDC189-212ENST00000546006 MLH1P40692 756 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CASP4P49662 377 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 SNRNP35Q16560 246 aaKnown RBP20.17■□□□□ 0.82
CCDC189-212ENST00000546006 SLC10A6Q3KNW5 377 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CEP135Q66GS9 1140 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 ALKAL1Q6UXT8 129 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 ABI1Q8IZP0 508 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 CSGALNACT2Q8N6G5 542 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 RDH13Q8NBN7 331 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 HELQQ8TDG4 1101 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 SNX27Q96L92 541 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 GAD1Q99259 594 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
CCDC189-212ENST00000546006 PLEKHA5Q9HAU0 1116 aa20.17■□□□□ 0.82
CCDC189-212ENST00000546006 RBAKQ9NYW8 714 aaPredicted RBP20.17■□□□□ 0.82
CCDC189-212ENST00000546006 ARL5CA6NH57 179 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 INPPL1O15357 1258 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 AKAP3O75969 853 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 ADRB2P07550 413 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 XKR4Q5GH76 650 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
CCDC189-212ENST00000546006 EEF2KMTQ96G04 330 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 ZFP42Q96MM3 310 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 CEP63Q96MT8 703 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 CASD1Q96PB1 797 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 TMEM117Q9H0C3 514 aa20.16■□□□□ 0.82
CCDC189-212ENST00000546006 RC3H2Q9HBD1 1191 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms