RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 GRPEL1Q9HAV7 217 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 RNF19AQ9NV58 838 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 SNTG2Q9NY99 539 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 RBAKQ9NYW8 714 aaPredicted RBP18.54■□□□□ 0.56
CADM1-220ENST00000546000 MAGEC2Q9UBF1 373 aaPredicted RBP18.54■□□□□ 0.56
CADM1-220ENST00000546000 ZMYND8Q9ULU4 1186 aaPredicted RBP18.54■□□□□ 0.56
CADM1-220ENST00000546000 FRMD4BQ9Y2L6 1034 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 SQORQ9Y6N5 450 aa18.54■□□□□ 0.56
CADM1-220ENST00000546000 PTPRJQ12913 1337 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 FGFR1OPO95684 399 aaKnown RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 CXCL10P02778 98 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 STAG3L1P0CL83 205 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 TPM4P67936 248 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 FANCCQ00597 558 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 NCBP1Q09161 790 aaKnown RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 ENOX2Q16206 610 aaKnown RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 C1orf220Q5T0J3 134 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 LMBRD2Q68DH5 695 aaPredicted RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 RTN4RL1Q86UN2 441 aaPredicted RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 USP38Q8NB14 1042 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 LPPQ93052 612 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 CCDC51Q96ER9 411 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 TRIM6Q9C030 488 aaPredicted RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 CPSF3Q9UKF6 684 aaKnown RBP18.53■□□□□ 0.56
CADM1-220ENST00000546000 IPPQ9Y573 584 aa18.53■□□□□ 0.56
CADM1-220ENST00000546000 CSF2RAP15509 400 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 ATF7P17544 494 aaPredicted RBP18.52■□□□□ 0.56
CADM1-220ENST00000546000 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.56
CADM1-220ENST00000546000 AKAP5P24588 427 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 GRM5P41594 1212 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 COPB1P53618 953 aaKnown RBP18.52■□□□□ 0.56
CADM1-220ENST00000546000 SPAG1Q07617 926 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 FAM114A1Q8IWE2 563 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 BRSK2Q8IWQ3 736 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 TRIM59Q8IWR1 403 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 TMEM174Q8WUU8 243 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 CCDC127Q96BQ5 260 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 FAM212AQ96EL1 285 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 MKNK1Q9BUB5 465 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 VPS16Q9H269 839 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 MMRN2Q9H8L6 949 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 PDE11AQ9HCR9 933 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 FAM105AQ9NUU6 356 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 INTS13Q9NVM9 706 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 ARMCX3Q9UH62 379 aaPredicted RBP18.52■□□□□ 0.56
CADM1-220ENST00000546000 LIMA1Q9UHB6 759 aaKnown RBP18.52■□□□□ 0.56
CADM1-220ENST00000546000 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.56
CADM1-220ENST00000546000 LRRIQ3A6PVS8 624 aaPredicted RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 RECQL4O94761 1208 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 ACRP10323 421 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 PRKCSHP14314 528 aaPredicted RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 EEF1GP26641 437 aaKnown RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 MARSP56192 900 aaKnown RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 BFSP1Q12934 665 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 FRMD5Q7Z6J6 570 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 RNF169Q8NCN4 708 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 SEPT8Q92599 483 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 MFSD14AQ96MC6 490 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
CADM1-220ENST00000546000 TUBGCP2Q9BSJ2 902 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 KLK14Q9P0G3 267 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 IFNKQ9P0W0 207 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 ANK1P16157 1881 aa18.51■□□□□ 0.55
CADM1-220ENST00000546000 RALGAPA2Q2PPJ7 1873 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 ZNF233A6NK53 670 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 KIAA0391O15091 583 aaKnown RBP18.5■□□□□ 0.55
CADM1-220ENST00000546000 SERPINC1P01008 464 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 DLATP10515 647 aaKnown RBP18.5■□□□□ 0.55
CADM1-220ENST00000546000 TCERG1LQ5VWI1 586 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 BADQ92934 168 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 CHST12Q9NRB3 414 aa18.5■□□□□ 0.55
CADM1-220ENST00000546000 LACTBL1A8MY62 500 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 PES1O00541 588 aaKnown RBP18.49■□□□□ 0.55
CADM1-220ENST00000546000 EVI5O60447 810 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 GNA14O95837 355 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 LDHAP00338 332 aaKnown RBP18.49■□□□□ 0.55
CADM1-220ENST00000546000 NFICP08651 508 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 CLTAP09496 248 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 KRT13P13646 458 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 VAMP7P51809 220 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 PPP3CAQ08209 521 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 PSMD6Q15008 389 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 MAN2A1Q16706 1144 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 GLRA4Q5JXX5 417 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 SCARA3Q6AZY7 606 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 ECHDC2Q86YB7 292 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 SLC35C1Q96A29 364 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 SNX27Q96L92 541 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 HTATIP2Q9BUP3 242 aa18.49■□□□□ 0.55
CADM1-220ENST00000546000 CCDC94Q9BW85 323 aaPredicted RBP18.49■□□□□ 0.55
CADM1-220ENST00000546000 XPO4Q9C0E2 1151 aaKnown RBP18.49■□□□□ 0.55
CADM1-220ENST00000546000 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
CADM1-220ENST00000546000 KIAA1586Q9HCI6 787 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms