RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GZMAP12544 262 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 HSD17B4P51659 736 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 MTMR1Q13613 665 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 AUHQ13825 339 aaKnown RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 PPP1R7Q15435 360 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 XKR9Q5GH70 373 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 HELQQ8TDG4 1101 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 ART4Q93070 314 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 HVCN1Q96D96 273 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 PWWP2AQ96N64 755 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 TAAR1Q96RJ0 339 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 ELAC2Q9BQ52 826 aaKnown RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 HERPUD2Q9BSE4 406 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 RAVER2Q9HCJ3 691 aaKnown RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 RASGRF2O14827 1237 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CYP1A2P05177 515 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 VIMP08670 466 aaKnown RBP16.94■□□□□ 0.3
LDLR-204ENST00000545707 HSPA6P17066 643 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CDR1P51861 262 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 MFAP3P55082 362 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 DLGAP5Q15398 846 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 C6orf118Q5T5N4 469 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 PARD3BQ8TEW8 1205 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
LDLR-204ENST00000545707 MLXIPLQ9NP71 852 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CHST7Q9NS84 486 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 GGT7Q9UJ14 662 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 MTUS1Q9ULD2 1270 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 USP20Q9Y2K6 914 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 TP73O15350 636 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 KRT5P13647 590 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CNGA1P29973 690 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CHKAP35790 457 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 RWDD2BP57060 319 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 TNIP1Q15025 636 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 TCEAL1Q15170 157 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CLUL1Q15846 466 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 SWT1Q5T5J6 900 aaKnown RBP16.94■□□□□ 0.3
LDLR-204ENST00000545707 FAM160B2Q86V87 743 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 C12orf56Q8IXR9 622 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CCDC197Q8NCU1 140 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 CENPTQ96BT3 561 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
LDLR-204ENST00000545707 ICAM1P05362 532 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 RARGP13631 454 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 SSTR3P32745 418 aaPredicted RBP16.93■□□□□ 0.3
LDLR-204ENST00000545707 PTGER2P43116 358 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 VPS41P49754 854 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 DRP2Q13474 957 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 LMBRD2Q68DH5 695 aaPredicted RBP16.93■□□□□ 0.3
LDLR-204ENST00000545707 KRT39Q6A163 491 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 FUKQ8N0W3 1084 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 ZNF341Q9BYN7 854 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 ACTR5Q9H9F9 607 aaPredicted RBP16.93■□□□□ 0.3
LDLR-204ENST00000545707 AAASQ9NRG9 546 aa16.93■□□□□ 0.3
LDLR-204ENST00000545707 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 MTA2O94776 668 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 ECEL1O95672 775 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CCNE2O96020 404 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 NPTX2P47972 431 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 PDE6CP51160 858 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CDR2Q01850 454 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 KRT17Q04695 432 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 ADCY2Q08462 1091 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 PLCB4Q15147 1175 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CYP1B1Q16678 543 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 EXOC3L1Q86VI1 746 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 PSPC1Q8WXF1 523 aaKnown RBP16.92■□□□□ 0.3
LDLR-204ENST00000545707 CPA5Q8WXQ8 436 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 DDX1Q92499 740 aaKnown RBP16.92■□□□□ 0.3
LDLR-204ENST00000545707 CDC42EP4Q9H3Q1 356 aaKnown RBP16.92■□□□□ 0.3
LDLR-204ENST00000545707 CTNNAL1Q9UBT7 734 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CNOT7Q9UIV1 285 aaKnown RBP16.92■□□□□ 0.3
LDLR-204ENST00000545707 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 TBX20Q9UMR3 447 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 UBIAD1Q9Y5Z9 338 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 PASKQ96RG2 1323 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 APBA3O96018 575 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 AGTP01019 485 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 MAPTP10636 758 aaKnown RBP16.92■□□□□ 0.3
LDLR-204ENST00000545707 CYB5D1Q6P9G0 228 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 TMEM161BQ8NDZ6 487 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 PARP2Q9UGN5 583 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 ASIC3Q9UHC3 531 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 TELO2Q9Y4R8 837 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
LDLR-204ENST00000545707 CCT8L1PA6NM43 557 aa16.91■□□□□ 0.3
LDLR-204ENST00000545707 O00370 1275 aa16.91■□□□□ 0.3
LDLR-204ENST00000545707 SORBS3O60504 671 aa16.91■□□□□ 0.3
LDLR-204ENST00000545707 GGPS1O95749 300 aa16.91■□□□□ 0.3
LDLR-204ENST00000545707 NCKAP1LP55160 1127 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms