RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 MGAT3Q09327 533 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 TRIM71Q2Q1W2 868 aaKnown RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 SEZ6Q53EL9 994 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CRELD2Q6UXH1 353 aaPredicted RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CPLX3Q8WVH0 158 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 DHX38Q92620 1227 aaKnown RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CGRRF1Q99675 332 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CRACR2AQ9BSW2 395 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 TRIM6Q9C030 488 aaPredicted RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 RPF1Q9H9Y2 349 aaKnown RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 TMEM8AQ9HCN3 771 aa14.95□□□□□ -0.02
SCARB1-209ENST00000545305 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 CPSF3Q9UKF6 684 aaKnown RBP14.95□□□□□ -0.02
SCARB1-209ENST00000545305 GPR182O15218 404 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 MFAP3LO75121 409 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 IL18RAPO95256 599 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 CHRNA1P02708 482 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 GYPCP04921 128 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 STAG3L1P0CL83 205 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 TNNI1P19237 187 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 TNFSF9P41273 254 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 GCLMP48507 274 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 KLK7P49862 253 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 MCCD1P59942 119 aaPredicted RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 POU5F1Q01860 360 aaKnown RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 RBL2Q08999 1139 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 FIGNQ5HY92 759 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 FAM26DQ5JW98 314 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 KRT39Q6A163 491 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 ANKLE1Q8NAG6 615 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 ZNF397Q8NF99 534 aaPredicted RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 CAGE1Q8TC20 777 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 FAM212AQ96EL1 285 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 PDE11AQ9HCR9 933 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 LUC7L2Q9Y383 392 aaKnown RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 NOC2LQ9Y3T9 749 aaKnown RBP14.94□□□□□ -0.02
SCARB1-209ENST00000545305 PCNTO95613 3336 aa14.94□□□□□ -0.02
SCARB1-209ENST00000545305 A0A1W2PQJ5 194 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 PMM2O15305 246 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CAPN2P17655 700 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 HOXA11P31270 313 aaPredicted RBP14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CASP14P31944 242 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 GRM5P41594 1212 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CDK7P50613 346 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 AP3M2P53677 418 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 OSTNP61366 133 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 PPP3CAQ08209 521 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 PAK2Q13177 524 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 BFSP2Q13515 415 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CBWD6Q4V339 395 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CBWD3Q5JTY5 395 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CBWD5Q5RIA9 395 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 C1orf220Q5T0J3 134 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CACNA2D4Q7Z3S7 1137 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 FAM126BQ8IXS8 530 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 USP38Q8NB14 1042 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 EDEM3Q9BZQ6 932 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 TMEM117Q9H0C3 514 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 INTS2Q9H0H0 1204 aaKnown RBP14.93□□□□□ -0.02
SCARB1-209ENST00000545305 PLCB1Q9NQ66 1216 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 TOPORSQ9NS56 1045 aaPredicted RBP14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CAPN11Q9UMQ6 739 aa14.93□□□□□ -0.02
SCARB1-209ENST00000545305 CXCL8P10145 99 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 GHRP10912 638 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 CKBP12277 381 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 GJA8P48165 433 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 YARSP54577 528 aaKnown RBP14.92□□□□□ -0.02
SCARB1-209ENST00000545305 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 NFX1Q12986 1120 aaKnown RBP14.92□□□□□ -0.02
SCARB1-209ENST00000545305 ENOX2Q16206 610 aaKnown RBP14.92□□□□□ -0.02
SCARB1-209ENST00000545305 TSR1Q2NL82 804 aaKnown RBP14.92□□□□□ -0.02
SCARB1-209ENST00000545305 FBXO47Q5MNV8 452 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 ZNF618Q5T7W0 954 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 TWF2Q6IBS0 349 aaKnown RBP14.92□□□□□ -0.02
SCARB1-209ENST00000545305 WDR49Q8IV35 697 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 LRRC8AQ8IWT6 810 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 CEP120Q8N960 986 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 CCDC112Q8NEF3 446 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 ACAP3Q96P50 834 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 PANX2Q96RD6 677 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 CEP72Q9P209 647 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 ST3GAL5Q9UNP4 418 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 DAAM1Q9Y4D1 1078 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 SQORQ9Y6N5 450 aa14.92□□□□□ -0.02
SCARB1-209ENST00000545305 TTC26A0AVF1 554 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
SCARB1-209ENST00000545305 TNNC2P02585 160 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 SLC9A1P19634 815 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 PON1P27169 355 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 KRT9P35527 623 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 FXR1P51114 621 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCARB1-209ENST00000545305 ADKP55263 362 aaKnown RBP14.91□□□□□ -0.02
SCARB1-209ENST00000545305 CLDN10P78369 228 aa14.91□□□□□ -0.02
SCARB1-209ENST00000545305 ZBED6P86452 979 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms