RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 PPME1Q9Y570 386 aa12.8□□□□□ -0.36
TMEM258-208ENST00000545210 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
TMEM258-208ENST00000545210 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 MAP1BP46821 2468 aaKnown RBP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 CCL16O15467 120 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 C8AP07357 584 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 HNRNPA1P09651 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 ARF4P18085 180 aaPredicted RBP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 PTENP60484 403 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 GRIK3Q13003 919 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 PCBP1Q15365 356 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 INF2Q27J81 1249 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 XKR9Q5GH70 373 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 PPM1LQ5SGD2 360 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 ZBTB41Q5SVQ8 909 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 BLOC1S2Q6QNY1 142 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 CDR2LQ86X02 465 aaPredicted RBP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 CEP57Q86XR8 500 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 HACE1Q8IYU2 909 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 MTRQ99707 1265 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 CLSTN3Q9BQT9 956 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 LXNQ9BS40 222 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 OSBPL6Q9BZF3 934 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 LTB4R2Q9NPC1 389 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 HCFC1R1Q9NWW0 138 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 RGL1Q9NZL6 768 aa12.79□□□□□ -0.36
TMEM258-208ENST00000545210 SF3B1O75533 1304 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM258-208ENST00000545210 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 B4GALT5O43286 388 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 NPTXRO95502 500 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 PDIA3P30101 505 aaKnown RBP12.78□□□□□ -0.36
TMEM258-208ENST00000545210 ARHGAP8P85298 464 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 PFKPQ01813 784 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 LMNB2Q03252 620 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 HSP90AA2PQ14568 343 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-208ENST00000545210 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
TMEM258-208ENST00000545210 NPY5RQ15761 445 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 PSMD5Q16401 504 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 AMHR2Q16671 573 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 TPRG1Q6ZUI0 275 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 SKAP1Q86WV1 359 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 C4orf19Q8IY42 314 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 TRIM22Q8IYM9 498 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 TTPALQ9BTX7 342 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 AGXT2Q9BYV1 514 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 KCNMB3Q9NPA1 279 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 PARP2Q9UGN5 583 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 COL4A2P08572 1712 aa12.78□□□□□ -0.36
TMEM258-208ENST00000545210 ADAM12O43184 909 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 LILRB5O75023 590 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 XYLBO75191 536 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 KIF4AO95239 1232 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 TGM1P22735 817 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 RPS6KB1P23443 525 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
TMEM258-208ENST00000545210 MAGEA9P43362 315 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CYP4A11Q02928 519 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 SSRP1Q08945 709 aaKnown RBP12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CAPSQ13938 189 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 TFDP1Q14186 410 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CTTNQ14247 550 aaKnown RBP12.77□□□□□ -0.37
TMEM258-208ENST00000545210 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-208ENST00000545210 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 DAGLBQ8NCG7 672 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
TMEM258-208ENST00000545210 SLC7A14Q8TBB6 771 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 ING5Q8WYH8 240 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 NELL1Q92832 810 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CLDN23Q96B33 292 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 DYDC2Q96IM9 177 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 AIFM3Q96NN9 605 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
TMEM258-208ENST00000545210 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 HOXA9P31269 272 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 RPS9P46781 194 aaKnown RBP12.76□□□□□ -0.37
TMEM258-208ENST00000545210 POU5F1BQ06416 359 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 MTAPQ13126 283 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 TUSC3Q13454 348 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 EPHA7Q15375 998 aa12.76□□□□□ -0.37
TMEM258-208ENST00000545210 PABPC1LQ4VXU2 614 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms