RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 TRAFD1O14545 582 aaPredicted RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 NVLO15381 856 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 MAGEB2O15479 319 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 CLDN3O15551 220 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TBX10O75333 385 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 KRT36O76013 467 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 RXRBP28702 533 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 ITGA8P53708 1063 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 EIF6P56537 245 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 RCN2Q14257 317 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 BMT2Q1RMZ1 405 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TAF1BQ53T94 588 aaPredicted RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 ACSBG2Q5FVE4 666 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SNX30Q5VWJ9 437 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TTBK2Q6IQ55 1244 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 IRGCQ6NXR0 463 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 LMO3Q8TAP4 145 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 GATA6Q92908 595 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 PRR11Q96HE9 360 aaPredicted RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 C9orf72Q96LT7 481 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 PAIP2Q9BPZ3 127 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 CADM1Q9BY67 442 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 ADAM33Q9BZ11 813 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 LRRC19Q9H756 370 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 JMJD4Q9H9V9 463 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 RGL1Q9NZL6 768 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 MIF4GDA9UHW6 222 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L15C9J2P7 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L13C9JLJ4 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L11C9JVI0 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L18D6R9N7 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L22D6RA61 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L17D6RBQ6 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L19D6RCP7 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L20D6RJB6 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TOM1O60784 492 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 ATP9AO75110 1047 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TCEA3O75764 348 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 ECEL1O95672 775 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 HSPA6P17066 643 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 TNFAIP3P21580 790 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 VPS41P49754 854 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L24Q0WX57 530 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 STRN3Q13033 797 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP4Q13107 963 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 KIF22Q14807 665 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SF3B3Q15393 1217 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 PDCD2Q16342 344 aaPredicted RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 MUM1Q2TAK8 710 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 WASHC2DQ5SRD0 308 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USP17L6PQ6QN14 398 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SLC30A10Q6XR72 485 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 RNF207Q6ZRF8 634 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 ARHGEF18Q6ZSZ5 1173 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 C16orf86Q6ZW13 317 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SMIM5Q71RC9 77 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 KIAA0825Q8IV33 1275 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 WDR60Q8WVS4 1066 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 PSPC1Q8WXF1 523 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 AZIN2Q96A70 460 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 DDX50Q9BQ39 737 aaKnown RBP8.47□□□□□ -1.05
DDX47-212ENST00000545038 DCLRE1BQ9H816 532 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 GPCPD1Q9NPB8 672 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 WHRNQ9P202 907 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 USH1CQ9Y6N9 552 aa8.47□□□□□ -1.05
DDX47-212ENST00000545038 ABCA3Q99758 1704 aa8.46□□□□□ -1.05
DDX47-212ENST00000545038 RASA4BC9J798 803 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 SLC16A3O15427 465 aaKnown RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 RASA4O43374 803 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 CALUO43852 315 aaPredicted RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 EDF1O60869 148 aaKnown RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 TJP3O95049 919 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 GCNT3O95395 438 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 SPATA31D3P0C874 917 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 RRM1P23921 792 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 NMT1P30419 496 aaKnown RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 SLC16A2P36021 539 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 CALCOCO2Q13137 446 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 ITPK1Q13572 414 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 RCN1Q15293 331 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 SLC1A5Q15758 541 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 SPATA31D4Q6ZUB0 917 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 RHOT2Q8IXI1 618 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 UBL4BQ8N7F7 174 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 SYT2Q8N9I0 419 aaPredicted RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 KAT5Q92993 513 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 GRAMD1AQ96CP6 724 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 AGPAT1Q99943 283 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 FAM118BQ9BPY3 351 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 INTS2Q9H0H0 1204 aaKnown RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 METTL14Q9HCE5 456 aaKnown RBP8.46□□□□□ -1.06
DDX47-212ENST00000545038 KRT82Q9NSB4 513 aa8.46□□□□□ -1.06
DDX47-212ENST00000545038 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms