RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 PCDHB2Q9Y5E7 798 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 ARID2Q68CP9 1835 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
PAAF1-215ENST00000544909 KIAA0754O94854 1291 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 COMTP21964 271 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 PTGIRP43119 386 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 BACE1P56817 501 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 CAV1Q03135 178 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 ADCY2Q08462 1091 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 UGCGQ16739 394 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 TAX1BP1Q86VP1 789 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
PAAF1-215ENST00000544909 CBWD2Q8IUF1 395 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 C10orf67Q8IYJ2 551 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 DDX1Q92499 740 aaKnown RBP13.37□□□□□ -0.27
PAAF1-215ENST00000544909 ATP6V0A4Q9HBG4 840 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 LOC285556D6RIA3 1793 aa13.37□□□□□ -0.27
PAAF1-215ENST00000544909 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 FSCN2O14926 492 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 MEFVO15553 781 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SGPL1O95470 568 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 NR3C2P08235 984 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 RARGP13631 454 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 KCNA2P16389 499 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 IFFO1Q0D2I5 559 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 NBPF9Q3BBW0 867 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 XKR3Q5GH77 459 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 DENND2CQ68D51 928 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 NLRP14Q86W24 1093 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CPXCR1Q8N123 301 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 REPS2Q8NFH8 660 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 NUP85Q9BW27 656 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 C1orf112Q9NSG2 853 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 WHRNQ9P202 907 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SSC5DA1L4H1 1573 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 LTBP3Q9NS15 1303 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 HNRNPDLO14979 420 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SPOPO43791 374 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 EXTL3O43909 919 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 STBD1O95210 358 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 AGTP01019 485 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 PMS2P54278 862 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 PSMD6Q15008 389 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 KRT71Q3SY84 523 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SLFN12LQ6IEE8 588 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CEP128Q6ZU80 1094 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 TRMT10CQ7L0Y3 403 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 DNAAF5Q86Y56 855 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 POMGNT1Q8WZA1 660 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CCT8L2Q96SF2 557 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 JPH1Q9HDC5 661 aaPredicted RBP13.36□□□□□ -0.27
PAAF1-215ENST00000544909 GRHL1Q9NZI5 618 aa13.36□□□□□ -0.27
PAAF1-215ENST00000544909 TESPA1A2RU30 521 aaPredicted RBP13.35□□□□□ -0.27
PAAF1-215ENST00000544909 GMNCA6NCL1 334 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 TISP43B9A030 160 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 CYP26A1O43174 497 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ATP9AO75110 1047 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 UNGP13051 313 aaPredicted RBP13.35□□□□□ -0.27
PAAF1-215ENST00000544909 DPEP1P16444 411 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ICAM3P32942 547 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ATP1A2P50993 1020 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 AP3M2P53677 418 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 CENPCQ03188 943 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 MTMR2Q13614 643 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ZDHHC24Q6UX98 284 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 MAEAQ7L5Y9 396 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 SLC47A2Q86VL8 602 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ZNF280CQ8ND82 737 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 ZNF473Q8WTR7 871 aaKnown RBP13.35□□□□□ -0.27
PAAF1-215ENST00000544909 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
PAAF1-215ENST00000544909 CCDC134Q9H6E4 229 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms