RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 IP6K2Q9UHH9 426 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 ST6GALNAC2Q9UJ37 374 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 ZNF180Q9UJW8 692 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 LIMCH1Q9UPQ0 1083 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 HDAC5Q9UQL6 1122 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 SIK3Q9Y2K2 1263 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 TSC22D4Q9Y3Q8 395 aa3.09□□□□□ -1.91
YBX3-214ENST00000544501 CFAP20Q9Y6A4 193 aaKnown RBP3.09□□□□□ -1.91
YBX3-214ENST00000544501 ZMYM3Q14202 1370 aa3.09□□□□□ -1.92
YBX3-214ENST00000544501 ATRNL1Q5VV63 1379 aa3.09□□□□□ -1.92
YBX3-214ENST00000544501 ARID1BQ8NFD5 2236 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CCDC154A6NI56 674 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 TBKBP1A7MCY6 615 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CAPN14A8MX76 684 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 GOLGA6L6A8MZA4 724 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 C1QTNF3-AMACRE9PGA6 284 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 MUSKO15146 869 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ADCY6O43306 1168 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 DTNBO60941 627 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 STC2O76061 302 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 SNRPA1P09661 255 aaKnown RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 CT47B1P0C2W7 299 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 PF4V1P10720 104 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ZNF20P17024 532 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 PDCP20941 246 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 MGAT1P26572 445 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 HIBADHP31937 336 aaKnown RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 CYP2C19P33261 490 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 PTPN7P35236 360 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ADAM17P78536 824 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CDC42EP1Q00587 391 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 GTF2H3Q13889 308 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 R3HDM1Q15032 1099 aaKnown RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 BMT2Q1RMZ1 405 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 FAM214AQ32MH5 1076 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 UAP1L1Q3KQV9 507 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 RRP12Q5JTH9 1297 aaKnown RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 MFSD14BQ5SR56 506 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 OTUD7BQ6GQQ9 843 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ZNF585AQ6P3V2 769 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 TTC7BQ86TV6 843 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 RHOT1Q8IXI2 618 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ELOA2Q8IYF1 753 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 PRR18Q8N4B5 295 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ZNF808Q8N4W9 903 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 MDM1Q8TC05 714 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 JPH3Q8WXH2 748 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 JDP2Q8WYK2 163 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CEP95Q96GE4 821 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 AIFM3Q96NN9 605 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ADOQ96SZ5 270 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CPPED1Q9BRF8 314 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 RTFDC1Q9BY42 306 aaPredicted RBP3.08□□□□□ -1.92
YBX3-214ENST00000544501 KRTAP3-1Q9BYR8 98 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 KCNH6Q9H252 994 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 TDP1Q9NUW8 608 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 ZIM2Q9NZV7 527 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 CALCOCO1Q9P1Z2 691 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 TCEAL9Q9UHQ7 104 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 SERPINB13Q9UIV8 391 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 EID1Q9Y6B2 187 aa3.08□□□□□ -1.92
YBX3-214ENST00000544501 PRR5-ARHGAP8B1AHC4 643 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 B8ZZF3 427 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 SLC16A6O15403 523 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 GPR32O75388 356 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 AMY1AP04745 511 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 DDCP20711 480 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 ACRV1P26436 265 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 MAN2A2P49641 1150 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 RABGGTBP53611 331 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 CLRN1P58418 232 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 ATP8B2P98198 1209 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 MTM1Q13496 603 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 RAB39AQ14964 217 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 VPS72Q15906 364 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 ATP2B3Q16720 1220 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 C3orf36Q3SXR2 165 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 ATAT1Q5SQI0 421 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 DACT2Q5SW24 774 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 THEMIS2Q5TEJ8 643 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 NXNQ6DKJ4 435 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 CXorf57Q6NSI4 855 aaKnown RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 USP45Q70EL2 814 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 PRRT2Q7Z6L0 340 aaPredicted RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 RSPH3Q86UC2 560 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 DRC7Q8IY82 874 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 CHPFQ8IZ52 775 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 REPS2Q8NFH8 660 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 OR52N2Q8NGI0 321 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 ZFP28Q8NHY6 868 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 CCHCR1Q8TD31 782 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 NSUN6Q8TEA1 469 aaKnown RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 ATXN2LQ8WWM7 1075 aaKnown RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 LSM14BQ9BX40 385 aaKnown RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 ZNF703Q9H7S9 590 aaPredicted RBP3.07□□□□□ -1.92
YBX3-214ENST00000544501 MAN1C1Q9NR34 630 aa3.07□□□□□ -1.92
YBX3-214ENST00000544501 AJAP1Q9UKB5 411 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms