RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 C2orf16Q68DN1 1984 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 TTLL13PA6NNM8 815 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 SPTLC1O15269 473 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 CCL16O15467 120 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 LAMTOR5O43504 91 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 P4HBP07237 508 aaKnown RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 ARF4P18085 180 aaPredicted RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 RFX1P22670 979 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 ARL2P36404 184 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 CCT2P78371 535 aaKnown RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 SPIRE1Q08AE8 756 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 MOXD1Q6UVY6 613 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 C4orf19Q8IY42 314 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 SHDQ96IW2 340 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 KXD1Q9BQD3 176 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 JPH2Q9BR39 696 aaPredicted RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 APOL6Q9BWW8 343 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 BCO2Q9BYV7 579 aa10.57□□□□□ -0.72
C2CD3-220ENST00000544293 PRMT8Q9NR22 394 aaPredicted RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 SMG5Q9UPR3 1016 aaKnown RBP10.57□□□□□ -0.72
C2CD3-220ENST00000544293 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 PTGESO14684 152 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 ASAP2O43150 1006 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 SLITRK3O94933 977 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 C8AP07357 584 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 ADRB1P08588 477 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 GLRA2P23416 452 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 AXLP30530 894 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 YWHABP31946 246 aaKnown RBP10.56□□□□□ -0.72
C2CD3-220ENST00000544293 RFC5P40937 340 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 NLRP5P59047 1200 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 POU5F1BQ06416 359 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 MTAPQ13126 283 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 CTTNQ14247 550 aaKnown RBP10.56□□□□□ -0.72
C2CD3-220ENST00000544293 UBXN2BQ14CS0 331 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 EMC2Q15006 297 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 EPHA7Q15375 998 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 INF2Q27J81 1249 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 EARS2Q5JPH6 523 aaKnown RBP10.56□□□□□ -0.72
C2CD3-220ENST00000544293 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 DAGLBQ8NCG7 672 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 CCDC148Q8NFR7 591 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 ATRIPQ8WXE1 791 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 NCDNQ9UBB6 729 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 DDX25Q9UHL0 483 aaKnown RBP10.56□□□□□ -0.72
C2CD3-220ENST00000544293 PPME1Q9Y570 386 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 SNX14Q9Y5W7 946 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 CACNA1GO43497 2377 aa10.56□□□□□ -0.72
C2CD3-220ENST00000544293 A0A087WWV3 80 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 PRR5-ARHGAP8B1AHC4 643 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 DTNBO60941 627 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 TADA2AO75478 443 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 KIF4AO95239 1232 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 POU2F2P09086 479 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HNRNPA1P09651 372 aaKnown RBP eCLIP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 FCARP24071 287 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HOXA9P31269 272 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HOXC13P31276 330 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 RPS9P46781 194 aaKnown RBP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 ARHGAP8P85298 464 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 CAPSQ13938 189 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 RAB33AQ14088 237 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 GAS6Q14393 721 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 KRT32Q14532 448 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 ZBTB41Q5SVQ8 909 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 TANGO2Q6ICL3 276 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 NOTUMQ6P988 496 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 MAMSTRQ6ZN01 415 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HASPINQ8TF76 798 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 CCDC51Q96ER9 411 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 DYDC2Q96IM9 177 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HSD17B14Q9BPX1 270 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 LXNQ9BS40 222 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 RTKNQ9BST9 563 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 HEBP1Q9NRV9 189 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 CFAP47Q6ZTR5 3102 aa10.55□□□□□ -0.72
C2CD3-220ENST00000544293 CASTOR2A6NHX0 329 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 INO80B-WBP1J3KQ70 363 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 NPTXRO95502 500 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 EDN1P05305 212 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 RPS6KB1P23443 525 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 HSPA4P34932 840 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 IRX6P78412 446 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 LMNB2Q03252 620 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 GRIK3Q13003 919 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 PCBP1Q15365 356 aaKnown RBP eCLIP10.54□□□□□ -0.72
C2CD3-220ENST00000544293 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 BMP2KLQ5H9B9 411 aa10.54□□□□□ -0.72
C2CD3-220ENST00000544293 WDR44Q5JSH3 913 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms