RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 ZBTB38Q8NAP3 1195 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 PPP1R36Q96LQ0 422 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 DTNAQ9Y4J8 743 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 DLGAP3O95886 979 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 PHKA2P46019 1235 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 MRPS25P82663 173 aaKnown RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 DNAL1Q4LDG9 190 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 RABGAP1LQ5R372 815 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ADCK2Q7Z695 626 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 COA7Q96BR5 231 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 TMA16Q96EY4 203 aaKnown RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ADAMTS1Q9UHI8 967 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 XDHP47989 1333 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 LRRIQ3A6PVS8 624 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 CYLC2Q14093 348 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 UBE2SQ16763 222 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 FAM167AQ96KS9 214 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 DEPDC7Q96QD5 511 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 HPS4Q9NQG7 708 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 BLMP54132 1417 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 A0A1W2PP64 1363 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 APOL1O14791 398 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 TLR2O60603 784 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 RALAP11233 206 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 HSPA9P38646 679 aaKnown RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 LRRC14Q15048 493 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 MDH1BQ5I0G3 518 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 SH3GL1Q99961 368 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KLC4Q9NSK0 619 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 CACNA2D2Q9NY47 1150 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 DIP2CQ9Y2E4 1556 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 TBXAS1P24557 533 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 R3HDM1Q15032 1099 aaKnown RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 TMEM270Q6UE05 265 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KRT77Q7Z794 578 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF513Q8N8E2 541 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 RPAP3Q9H6T3 665 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KRCC1Q9NPI7 259 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 SYBUQ9NX95 663 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 DCDC2Q9UHG0 476 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 SRPRBQ9Y5M8 271 aaKnown RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 FAM187AA6NFU0 413 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KIRREL3Q8IZU9 778 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 KRT78Q8N1N4 520 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 GIMAP8Q8ND71 665 aaPredicted RBP10.96□□□□□ -0.65
PCDH9-204ENST00000544246 VPS50Q96JG6 964 aa10.96□□□□□ -0.65
PCDH9-204ENST00000544246 AP3B1O00203 1094 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 RNF103O00237 685 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 MAP3K13O43283 966 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 MOCS2O96007 188 aaPredicted RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 DAB2IPQ5VWQ8 1189 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 FBXO38Q6PIJ6 1188 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 SNX31Q8N9S9 440 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 EME1Q96AY2 570 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 SPON2Q9BUD6 331 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 PRDM5Q9NQX1 630 aaPredicted RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 NBPF26B4DH59 902 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 CHL1O00533 1208 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 CLDN3O15551 220 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 GGPS1O95749 300 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 IRX1P78414 480 aaPredicted RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 LAMC2Q13753 1193 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 DDX53Q86TM3 631 aaKnown RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 NBPF15Q8N660 670 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 TSPAN17Q96FV3 270 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 HES6Q96HZ4 224 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 ATP6V1G3Q96LB4 118 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 PCSK1NQ9UHG2 260 aa10.96□□□□□ -0.66
PCDH9-204ENST00000544246 EDC4Q6P2E9 1401 aaKnown RBP10.96□□□□□ -0.66
PCDH9-204ENST00000544246 ERVV-2B6SEH9 535 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 PSMD3O43242 534 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 KDSRQ06136 332 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 BFSP2Q13515 415 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 WNT8AQ9H1J5 351 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ANKRD65E5RJM6 399 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
PCDH9-204ENST00000544246 KCNA3P22001 575 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ATXN7L3BQ96GX2 97 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 C11orf70Q9BRQ4 267 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SPATA16Q9BXB7 569 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 MLNP12872 115 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 COPB2P35606 906 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 IREB2P48200 963 aaKnown RBP10.95□□□□□ -0.66
PCDH9-204ENST00000544246 BCAR1P56945 870 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
PCDH9-204ENST00000544246 ZNF568Q3ZCX4 644 aa10.95□□□□□ -0.66
PCDH9-204ENST00000544246 POTEAQ6S8J7 498 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms