RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 IFT122Q9HBG6 1241 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 ADGRA2Q96PE1 1338 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 HBP1O60381 514 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
HCFC2-202ENST00000544223 GARTP22102 1010 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 AMPD2Q01433 879 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 MARCH8Q5T0T0 291 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 ABRAQ8N0Z2 381 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 COG1Q8WTW3 980 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 ERO1AQ96HE7 468 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 FNBP1Q96RU3 617 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 NUCKS1Q9H1E3 243 aaKnown RBP14.8□□□□□ -0.04
HCFC2-202ENST00000544223 ABHD16BQ9H3Z7 469 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 RAB20Q9NX57 234 aa14.8□□□□□ -0.04
HCFC2-202ENST00000544223 CGNQ9P2M7 1197 aaKnown RBP14.8□□□□□ -0.04
HCFC2-202ENST00000544223 AOC2O75106 756 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 VNN1O95497 513 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 RNASE9P60153 205 aaKnown RBP14.79□□□□□ -0.04
HCFC2-202ENST00000544223 MAP2K5Q13163 448 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 PRPF4BQ13523 1007 aaKnown RBP14.79□□□□□ -0.04
HCFC2-202ENST00000544223 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 C17orf99Q6UX52 265 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 PHLDB2Q86SQ0 1253 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 FBXL13Q8NEE6 735 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 ACO2Q99798 780 aaKnown RBP14.79□□□□□ -0.04
HCFC2-202ENST00000544223 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 TMEM8AQ9HCN3 771 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 MYO6Q9UM54 1294 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 ATMINO43313 823 aaPredicted RBP14.79□□□□□ -0.04
HCFC2-202ENST00000544223 TADA3O75528 432 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 PALMO75781 387 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 CST3P01034 146 aaPredicted RBP14.79□□□□□ -0.04
HCFC2-202ENST00000544223 TRIM32Q13049 653 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 C2CD6Q53TS8 623 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 HELQQ8TDG4 1101 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 CXCL16Q9H2A7 254 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 OSGEPQ9NPF4 335 aa14.79□□□□□ -0.04
HCFC2-202ENST00000544223 SIP14410 1827 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 RBM47A0AV96 593 aaKnown RBP14.78□□□□□ -0.04
HCFC2-202ENST00000544223 SLC15A5A6NIM6 579 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 PDE2AO00408 941 aaPredicted RBP14.78□□□□□ -0.04
HCFC2-202ENST00000544223 FAM189A1O60320 539 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 SLC10A3P09131 477 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
HCFC2-202ENST00000544223 MBTD1Q05BQ5 628 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 MAPK6Q16659 721 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 NOP9Q86U38 636 aaKnown RBP14.78□□□□□ -0.04
HCFC2-202ENST00000544223 NOA1Q8NC60 698 aaKnown RBP14.78□□□□□ -0.04
HCFC2-202ENST00000544223 SCLT1Q96NL6 688 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 MMS19Q96T76 1030 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 MTMR12Q9C0I1 747 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 CDC23Q9UJX2 597 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
HCFC2-202ENST00000544223 MANSC4A6NHS7 340 aaPredicted RBP14.77□□□□□ -0.04
HCFC2-202ENST00000544223 TNPO2O14787 897 aaKnown RBP14.77□□□□□ -0.04
HCFC2-202ENST00000544223 NOP2P46087 812 aaKnown RBP14.77□□□□□ -0.04
HCFC2-202ENST00000544223 CETN1Q12798 172 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 PPFIA1Q13136 1202 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 GRIK4Q16099 956 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 NLRP7Q8WX94 980 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 MS4A14Q96JA4 679 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.04
HCFC2-202ENST00000544223 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.04
HCFC2-202ENST00000544223 GABRQQ9UN88 632 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 STYXL1Q9Y6J8 313 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 CNTNAP2Q9UHC6 1331 aa14.77□□□□□ -0.04
HCFC2-202ENST00000544223 MYADML2A6NDP7 307 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 ABLIM1O14639 778 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 HLA-DRAP01903 254 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 TUBB4AP04350 444 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 MMEP08473 750 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 CFHP08603 1231 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 KRT5P13647 590 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 PRKCIP41743 596 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 MXD4Q14582 209 aaPredicted RBP14.77□□□□□ -0.05
HCFC2-202ENST00000544223 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
HCFC2-202ENST00000544223 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 TLK2Q86UE8 772 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.05
HCFC2-202ENST00000544223 TMEM174Q8WUU8 243 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 ARHGEF26Q96DR7 871 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 PCDHB18PQ96TA0 734 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 MRPL4Q9BYD3 311 aaKnown RBP14.77□□□□□ -0.05
HCFC2-202ENST00000544223 FBXL5Q9UKA1 691 aa14.77□□□□□ -0.05
HCFC2-202ENST00000544223 PPFIA4O75335 1185 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 RHOXF2BP0C7M4 288 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
HCFC2-202ENST00000544223 FERP16591 822 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 PIK3CAP42336 1068 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 GALCP54803 685 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ZNF568Q3ZCX4 644 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 FBXO38Q6PIJ6 1188 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 TRAPPC11Q7Z392 1133 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 ZBTB8OSQ8IWT0 167 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 RHOXF2Q9BQY4 288 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 GJD2Q9UKL4 321 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 GPR25O00155 361 aa14.76□□□□□ -0.05
HCFC2-202ENST00000544223 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms