RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 FAM228BP0C875 321 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 IRX5P78411 483 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 LACTBP83111 547 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 PRPF4BQ13523 1007 aaKnown RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 FAM187BQ17R55 369 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 PRMT7Q9NVM4 692 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 RAB20Q9NX57 234 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 ADAMTS1Q9UHI8 967 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 A0A087WZ62 844 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 TULP1O00294 542 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 OGTO15294 1046 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 AOC2O75106 756 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 IQCF3P0C7M6 154 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 HARSP12081 509 aaKnown RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 CPT1AP50416 773 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 ARHGAP44Q17R89 818 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 ATF7IP2Q5U623 682 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 ZBTB33Q86T24 672 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 BRSK2Q8IWQ3 736 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 FDXACB1Q9BRP7 624 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 TCHPQ9BT92 498 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.46■■□□□ 1.03
COPS7A-218ENST00000543939 AP5M1Q9H0R1 490 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 SETD4Q9NVD3 440 aa21.46■■□□□ 1.03
COPS7A-218ENST00000543939 FOXN3O00409 490 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-218ENST00000543939 B4GALT5O43286 388 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 C4BPAP04003 597 aaKnown RBP21.45■■□□□ 1.02
COPS7A-218ENST00000543939 VTNP04004 478 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 KIAA0753Q2KHM9 967 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 ZACNQ401N2 412 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 MPZL3Q6UWV2 235 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 KIAA0319LQ8IZA0 1049 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 TXLNBQ8N3L3 684 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 TRPV1Q8NER1 839 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 LMBR1Q8WVP7 490 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 MAP7D2Q96T17 732 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 CGRRF1Q99675 332 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 TNFSF13BQ9Y275 285 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 DUSP10Q9Y6W6 482 aa21.45■■□□□ 1.02
COPS7A-218ENST00000543939 PTPRJQ12913 1337 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 HAS3O00219 553 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 URI1O94763 535 aaPredicted RBP21.44■■□□□ 1.02
COPS7A-218ENST00000543939 CCDC172P0C7W6 258 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 SMIM10L2AP0DMW4 78 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 SMIM10L2BP0DMW5 78 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 TNNI1P19237 187 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 TNFSF9P41273 254 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 SEZ6Q53EL9 994 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 NENFQ9UMX5 172 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 ANK1P16157 1881 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 CASP8AP2Q9UKL3 1982 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 NRCAMQ92823 1304 aa21.44■■□□□ 1.02
COPS7A-218ENST00000543939 AKR1A1P14550 325 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 MFSD10Q14728 455 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 KIF22Q14807 665 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 AMHR2Q16671 573 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 DEFB115Q30KQ5 88 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 EEF1DP3Q658K8 133 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 LMBRD2Q68DH5 695 aaPredicted RBP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 OLIG1Q8TAK6 271 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 HELQQ8TDG4 1101 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 KAT5Q92993 513 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 FAM84AQ96KN4 292 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 CAPNS2Q96L46 248 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 KREMEN1Q96MU8 473 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 NT5C1BQ96P26 610 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 SYT11Q9BT88 431 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 LUC7LQ9NQ29 371 aaKnown RBP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 CPSF3Q9UKF6 684 aaKnown RBP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 ZEB2O60315 1214 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 ZC3H11AO75152 810 aaKnown RBP eCLIP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 FLT3LGP49771 235 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 PSEN2P49810 448 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 C10orf76Q5T2E6 689 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 TDRD10Q5VZ19 366 aaKnown RBP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 NFRKBQ6P4R8 1299 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 REM2Q8IYK8 340 aaPredicted RBP21.43■■□□□ 1.02
COPS7A-218ENST00000543939 TRIB2Q92519 343 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 PPP1R16BQ96T49 567 aa21.43■■□□□ 1.02
COPS7A-218ENST00000543939 MBLAC1A4D2B0 266 aaPredicted RBP21.42■■□□□ 1.02
COPS7A-218ENST00000543939 CTAGE9A4FU28 777 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 CTIFO43310 598 aaKnown RBP21.42■■□□□ 1.02
COPS7A-218ENST00000543939 TBC1D8O95759 1140 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 MYL3P08590 195 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 CYBAP13498 195 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 MFAP3P55082 362 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 BEX3Q00994 111 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 BMS1Q14692 1282 aaKnown RBP21.42■■□□□ 1.02
COPS7A-218ENST00000543939 ZNF568Q3ZCX4 644 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 MFSD14CQ5VZR4 134 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 ZNF410Q86VK4 478 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 VPS36Q86VN1 386 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 PPM1KQ8N3J5 372 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 NAGPAQ9UK23 515 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 MYH10P35580 1976 aa21.42■■□□□ 1.02
COPS7A-218ENST00000543939 TRIP12Q14669 1992 aaPredicted RBP21.42■■□□□ 1.02
COPS7A-218ENST00000543939 DDX3XO00571 662 aaKnown RBP eCLIP21.41■■□□□ 1.024e-8■■■■■ 39.8
COPS7A-218ENST00000543939 DUSP11O75319 330 aaKnown RBP21.41■■□□□ 1.02
COPS7A-218ENST00000543939 HLA-DRAP01903 254 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms