RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
RTN3-213ENST00000543552 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 KLK14Q9P0G3 267 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 FNIP2Q9P278 1114 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 KIAA1024Q9UPX6 916 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 DNM3Q9UQ16 869 aa14.47□□□□□ -0.09
RTN3-213ENST00000543552 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 RECQL4O94761 1208 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 THP07101 528 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 LIG1P18858 919 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 PRPHP41219 470 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 PTGDRQ13258 359 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 GSTCDQ8NEC7 633 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 DRC1Q96MC2 740 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 KIF2CQ99661 725 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
RTN3-213ENST00000543552 CCDC195A0A1B0GUA6 201 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 BRD1O95696 1058 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 DMP1Q13316 513 aaPredicted RBP14.45□□□□□ -0.1
RTN3-213ENST00000543552 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 ATF7IP2Q5U623 682 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 TAS1R1Q7RTX1 841 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 KCTD17Q8N5Z5 321 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 RIN2Q8WYP3 895 aaPredicted RBP14.45□□□□□ -0.1
RTN3-213ENST00000543552 TIPINQ9BVW5 301 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 GPR62Q9BZJ7 368 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 ZDHHC7Q9NXF8 308 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 SNTG2Q9NY99 539 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 KCNG1Q9UIX4 513 aa14.45□□□□□ -0.1
RTN3-213ENST00000543552 F8W810 466 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 H3BQV1 296 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 K7ERI5 159 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 ASGR2P07307 311 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 NBR1Q14596 966 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 ALYREFQ86V81 257 aaKnown RBP14.44□□□□□ -0.1
RTN3-213ENST00000543552 SMG7Q92540 1137 aaKnown RBP14.44□□□□□ -0.1
RTN3-213ENST00000543552 TTPALQ9BTX7 342 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 C17orf75Q9HAS0 396 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 PIDD1Q9HB75 910 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
RTN3-213ENST00000543552 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
RTN3-213ENST00000543552 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
RTN3-213ENST00000543552 PCDHB6Q9Y5E3 794 aa14.44□□□□□ -0.1
RTN3-213ENST00000543552 CLUHO75153 1309 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 CASTOR2A6NHX0 329 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 CCDC169A6NNP5 214 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 PTGESO14684 152 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 TGM5O43548 720 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 KIF4AO95239 1232 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 AVPR2P30518 371 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 MCM2P49736 904 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 MRE11P49959 708 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
RTN3-213ENST00000543552 YARSP54577 528 aaKnown RBP14.43□□□□□ -0.1
RTN3-213ENST00000543552 TDGQ13569 410 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 ECM1Q16610 540 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 LIN9Q5TKA1 542 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 PALB2Q86YC2 1186 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 PRSS33Q8NF86 280 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 UROC1Q96N76 676 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 CCDC94Q9BW85 323 aaPredicted RBP14.43□□□□□ -0.1
RTN3-213ENST00000543552 MRPL4Q9BYD3 311 aaKnown RBP14.43□□□□□ -0.1
RTN3-213ENST00000543552 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 KMT2EQ8IZD2 1858 aa14.43□□□□□ -0.1
RTN3-213ENST00000543552 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 TTLL13PA6NNM8 815 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 PAPLNO95428 1278 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
RTN3-213ENST00000543552 NPTX2P47972 431 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 PEX3P56589 373 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 ZNF568Q3ZCX4 644 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 IER5LQ5T953 404 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 FAM171A1Q5VUB5 890 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 CDK5RAP3Q96JB5 506 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 TMEM134Q9H6X4 195 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
RTN3-213ENST00000543552 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.42□□□□□ -0.1
RTN3-213ENST00000543552 C2orf16Q68DN1 1984 aa14.42□□□□□ -0.1
RTN3-213ENST00000543552 TMEM189-UBE2V1I3L0A0 370 aa14.41□□□□□ -0.1
RTN3-213ENST00000543552 HIP1RO75146 1068 aa14.41□□□□□ -0.1
RTN3-213ENST00000543552 RFPL2O75678 378 aa14.41□□□□□ -0.1
RTN3-213ENST00000543552 SMTNP53814 917 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms