RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
TMED3-204ENST00000543455 ADPGKQ9BRR6 497 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 PHF7Q9BWX1 381 aaPredicted RBP20.46■□□□□ 0.87
TMED3-204ENST00000543455 C1QTNF1Q9BXJ1 281 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 GPR62Q9BZJ7 368 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 CDT1Q9H211 546 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 KMT5AQ9NQR1 393 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 GDAQ9Y2T3 454 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 VWA8A3KMH1 1905 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 MYH15Q9Y2K3 1946 aa20.46■□□□□ 0.87
TMED3-204ENST00000543455 FAM86C2PA6NEL3 165 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 SLC26A4O43511 780 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 PROZP22891 400 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 IGFBP6P24592 240 aaPredicted RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 LONP1P36776 959 aaKnown RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 CBX2Q14781 532 aaPredicted RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 KARSQ15046 597 aaKnown RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 DCAF4L1Q3SXM0 396 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 TMEM161BQ8NDZ6 487 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 SPIRE2Q8WWL2 714 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 CDK5RAP3Q96JB5 506 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 B3GALT6Q96L58 329 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 RPS6KC1Q96S38 1066 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 POP1Q99575 1024 aaKnown RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 TARS2Q9BW92 718 aaKnown RBP20.45■□□□□ 0.86
TMED3-204ENST00000543455 C17orf75Q9HAS0 396 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 CHST7Q9NS84 486 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 STK39Q9UEW8 545 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 C2orf16Q68DN1 1984 aa20.45■□□□□ 0.86
TMED3-204ENST00000543455 C2CD2LO14523 706 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 MEFVO15553 781 aaPredicted RBP20.44■□□□□ 0.86
TMED3-204ENST00000543455 PLS3P13797 630 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 PLCG1P19174 1290 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 CLCN4P51793 760 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 TUSC3Q13454 348 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 RNF135Q8IUD6 432 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 LRFN3Q9BTN0 628 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 COLEC11Q9BWP8 271 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 MRPL17Q9NRX2 175 aaKnown RBP20.44■□□□□ 0.86
TMED3-204ENST00000543455 RAPGEFL1Q9UHV5 662 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
TMED3-204ENST00000543455 ADAM28Q9UKQ2 775 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 CITO14578 2027 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 DENND4AQ7Z401 1863 aa20.44■□□□□ 0.86
TMED3-204ENST00000543455 CASTOR2A6NHX0 329 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 WEE2P0C1S8 567 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 MAPTP10636 758 aaKnown RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 MARCKSP29966 332 aaPredicted RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 UBA7P41226 1012 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 DSG1Q02413 1049 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 SPECC1Q5M775 1068 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 ZBTB45Q96K62 511 aaPredicted RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 MRPL4Q9BYD3 311 aaKnown RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 ADAM7Q9H2U9 754 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 RXFP1Q9HBX9 757 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 DCXO43602 365 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 GPR37L1O60883 481 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 TECTAO75443 2155 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 KIF4AO95239 1232 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 URODP06132 367 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 THP07101 528 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 GRM5P41594 1212 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 GLUD2P49448 558 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 MCM6Q14566 821 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 PDCD11Q14690 1871 aaKnown RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 RARS2Q5T160 578 aaKnown RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 RAD54LQ92698 747 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 EPSTI1Q96J88 318 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 PPP1R10Q96QC0 940 aaKnown RBP20.43■□□□□ 0.86
TMED3-204ENST00000543455 REEP2Q9BRK0 252 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 CCSER1Q9C0I3 900 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 POMKQ9H5K3 350 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 MUTYHQ9UIF7 546 aa20.43■□□□□ 0.86
TMED3-204ENST00000543455 MTCL1Q9Y4B5 1905 aaKnown RBP20.42■□□□□ 0.86
TMED3-204ENST00000543455 TEX28O15482 410 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 BRD1O95696 1058 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 ZNF568Q3ZCX4 644 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 XKR4Q5GH76 650 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 HERC4Q5GLZ8 1057 aaPredicted RBP20.42■□□□□ 0.86
TMED3-204ENST00000543455 GLRA4Q5JXX5 417 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 ALKAL1Q6UXT8 129 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 ZBTB33Q86T24 672 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 GPBP1Q86WP2 473 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 HASPINQ8TF76 798 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 CALML4Q96GE6 196 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 RPGRIP1Q96KN7 1286 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 FBXL18Q96ME1 805 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 CLIC6Q96NY7 704 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 USP28Q96RU2 1077 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 EMILIN2Q9BXX0 1053 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 DZANK1Q9NVP4 752 aa20.42■□□□□ 0.86
TMED3-204ENST00000543455 STX6O43752 255 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 NR1I2O75469 434 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 COL9A1P20849 921 aa20.41■□□□□ 0.86
TMED3-204ENST00000543455 KLRC2P26717 231 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms