RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 ZSWIM1Q9BR11 485 aa17.5■□□□□ 0.39
BECN1-203ENST00000543382 ARHGAP28Q9P2N2 729 aa17.5■□□□□ 0.39
BECN1-203ENST00000543382 PEX5P50542 639 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 SKOR1P84550 965 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 BICD1Q96G01 975 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 ATP6V0A4Q9HBG4 840 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 RSPH14Q9UHP6 348 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 TRPC6Q9Y210 931 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 C19orf81C9J6K1 198 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 ATP2A1O14983 1001 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 CDR2Q01850 454 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 CD101Q93033 1021 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 NUP85Q9BW27 656 aa17.49■□□□□ 0.39
BECN1-203ENST00000543382 UTP11Q9Y3A2 253 aaKnown RBP17.49■□□□□ 0.39
BECN1-203ENST00000543382 MTA2O94776 668 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 DR1Q01658 176 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 CNTN2Q02246 1040 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 PDCLQ13371 301 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 BRDTQ58F21 947 aaPredicted RBP17.48■□□□□ 0.39
BECN1-203ENST00000543382 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 ZNF564Q8TBZ8 553 aaPredicted RBP17.48■□□□□ 0.39
BECN1-203ENST00000543382 TMEM143Q96AN5 459 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 ZNF653Q96CK0 615 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 PDE6CP51160 858 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 SUPT20HL1Q3ZLR7 823 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 TMC3Q7Z5M5 1100 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 C18orf8Q96DM3 657 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 ATP6V1G3Q96LB4 118 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 HAPLN2Q9GZV7 340 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 GGA3Q9NZ52 723 aa17.48■□□□□ 0.39
BECN1-203ENST00000543382 MIF4GDA9UHW6 222 aaKnown RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 TULP2O00295 520 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 EIF3HO15372 352 aaKnown RBP eCLIP17.47■□□□□ 0.39
BECN1-203ENST00000543382 CYP1A2P05177 515 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 PYGMP11217 842 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 GARTP22102 1010 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 RTP1P59025 263 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 EMC2Q15006 297 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 SRLQ86TD4 932 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 APOBEC3FQ8IUX4 373 aaKnown RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 PRELID2Q8N945 189 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 LRRC45Q96CN5 670 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 RPS6KC1Q96S38 1066 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 TMBIM4Q9HC24 238 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 LRRC4CQ9HCJ2 640 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 AFG3L2Q9Y4W6 797 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 POLR2AP24928 1970 aaKnown RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 TCRBV7S2A1N4TA0A589 114 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 DKC1O60832 514 aaKnown RBP eCLIP17.47■□□□□ 0.39
BECN1-203ENST00000543382 GTF2H1P32780 548 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 CTNNA1P35221 906 aaKnown RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 ZNF844Q08AG5 666 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 DUPD1Q68J44 220 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 C15orf39Q6ZRI6 1047 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 UBL4BQ8N7F7 174 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 ASAP3Q8TDY4 903 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 UBLCP1Q8WVY7 318 aaPredicted RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 CDHR1Q96JP9 859 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 IFT74Q96LB3 600 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
BECN1-203ENST00000543382 FAM114A2Q9NRY5 505 aa17.47■□□□□ 0.39
BECN1-203ENST00000543382 PTPRJQ12913 1337 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 KRT5P13647 590 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 HIRAP54198 1017 aaPredicted RBP17.46■□□□□ 0.39
BECN1-203ENST00000543382 NLRP11P59045 1033 aaKnown RBP17.46■□□□□ 0.39
BECN1-203ENST00000543382 GNPTABQ3T906 1256 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 TTC27Q6P3X3 843 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 LRIG3Q6UXM1 1119 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 KDM7AQ6ZMT4 941 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 GTF3C4Q9UKN8 822 aa17.46■□□□□ 0.39
BECN1-203ENST00000543382 RRP15Q9Y3B9 282 aaKnown RBP17.46■□□□□ 0.39
BECN1-203ENST00000543382 GOLGA6L10A0A0M3HER8 536 aa17.46■□□□□ 0.38
BECN1-203ENST00000543382 ACOT2P49753 483 aa17.46■□□□□ 0.38
BECN1-203ENST00000543382 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.38
BECN1-203ENST00000543382 JAMLQ86YT9 394 aa17.46■□□□□ 0.38
BECN1-203ENST00000543382 ZBTB45Q96K62 511 aaPredicted RBP17.46■□□□□ 0.38
BECN1-203ENST00000543382 ERP44Q9BS26 406 aa17.46■□□□□ 0.38
BECN1-203ENST00000543382 WDR90Q96KV7 1748 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 MYO1FO00160 1098 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 EDN1P05305 212 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 NR1D1P20393 614 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 PTGIRP43119 386 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 LIG4P49917 911 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 POLGP54098 1239 aaPredicted RBP17.45■□□□□ 0.38
BECN1-203ENST00000543382 SPOPLQ6IQ16 392 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 MTFR1LQ9H019 292 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 CENPHQ9H3R5 247 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 ZDHHC18Q9NUE0 388 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 LOC285556D6RIA3 1793 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 ANKRD65E5RJM6 399 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 EXTL3O43909 919 aa17.45■□□□□ 0.38
BECN1-203ENST00000543382 GLRA2P23416 452 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms