RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 CD52P31358 61 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 OSTNP61366 133 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 ENPEPQ07075 957 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 FAAP100Q0VG06 881 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 KCNH2Q12809 1159 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 PSMD6Q15008 389 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 TWF2Q6IBS0 349 aaKnown RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 PARD3BQ8TEW8 1205 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 CCDC94Q9BW85 323 aaPredicted RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 TRIM6Q9C030 488 aaPredicted RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 HIPK3Q9H422 1215 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 CHST12Q9NRB3 414 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
DDB1-221ENST00000543162 PADI3Q9ULW8 664 aa11.6□□□□□ -0.55
DDB1-221ENST00000543162 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 DLATP10515 647 aaKnown RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 EN2P19622 333 aaPredicted RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 TNFSF9P41273 254 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 GRM5P41594 1212 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 DLG4P78352 724 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 POU5F1Q01860 360 aaKnown RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 CCDC173Q0VFZ6 552 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 LRRC26Q2I0M4 334 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 VSTM4Q8IW00 320 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 BRSK2Q8IWQ3 736 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 CEP120Q8N960 986 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 PLEKHO2Q8TD55 490 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 FNBP1Q96RU3 617 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 EIF2AQ9BY44 585 aaKnown RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 OSBPL7Q9BZF2 842 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 RPF1Q9H9Y2 349 aaKnown RBP11.59□□□□□ -0.55
DDB1-221ENST00000543162 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
DDB1-221ENST00000543162 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 N4BP1O75113 896 aaKnown RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 IL18RAPO95256 599 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 CLTBP09497 229 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 CXCL8P10145 99 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 GTF2H1P32780 548 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 FMO5P49326 533 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 MCCD1P59942 119 aaPredicted RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 MYL7Q01449 175 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 MBTPS1Q14703 1052 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 SYCP1Q15431 976 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 SURF1Q15526 300 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 ENOX2Q16206 610 aaKnown RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 PTPN21Q16825 1174 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 C1orf220Q5T0J3 134 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 UBXN11Q5T124 520 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 SPECC1LQ69YQ0 1117 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 TMC6Q7Z403 805 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 SPC24Q8NBT2 197 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 PDLIM2Q96JY6 352 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 PCMTD1Q96MG8 357 aaPredicted RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 ACAP3Q96P50 834 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 ERGIC2Q96RQ1 377 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 POP1Q99575 1024 aaKnown RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
DDB1-221ENST00000543162 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
DDB1-221ENST00000543162 GTPBP10A4D1E9 387 aaKnown RBP11.57□□□□□ -0.56
DDB1-221ENST00000543162 GOLGA6L6A8MZA4 724 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PARNO95453 639 aaKnown RBP11.57□□□□□ -0.56
DDB1-221ENST00000543162 TNNI1P19237 187 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PBX1P40424 430 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 GCLMP48507 274 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 YARSP54577 528 aaKnown RBP11.57□□□□□ -0.56
DDB1-221ENST00000543162 WNT7BP56706 349 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 CLDN10P78369 228 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PPP3CAQ08209 521 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 CETN1Q12798 172 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 DSC3Q14574 896 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 HACE1Q8IYU2 909 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PPP1R9BQ96SB3 815 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 CGRRF1Q99675 332 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 ADAM2Q99965 735 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PPP1R12CQ9BZL4 782 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 TMX1Q9H3N1 280 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
DDB1-221ENST00000543162 TOPORSQ9NS56 1045 aaPredicted RBP11.57□□□□□ -0.56
DDB1-221ENST00000543162 FAM105AQ9NUU6 356 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 SNTG2Q9NY99 539 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 TBX21Q9UL17 535 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 HES2Q9Y543 173 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 IPPQ9Y573 584 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 PCDHB2Q9Y5E7 798 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 ITIH6Q6UXX5 1313 aa11.57□□□□□ -0.56
DDB1-221ENST00000543162 LACTBL1A8MY62 500 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 P4HA2O15460 535 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 NBNO60934 754 aa11.56□□□□□ -0.56
DDB1-221ENST00000543162 PTMAP06454 111 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms