RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 XPO6Q96QU8 1125 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 APOL1O14791 398 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 CUL3Q13618 768 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 NAB2Q15742 525 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 DUOXA2Q1HG44 320 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 IGDCC4Q8TDY8 1250 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 STX18Q9P2W9 335 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 MAN1A2O60476 641 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 MTHFD1LQ6UB35 978 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ULK4Q96C45 1275 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ZMAT2Q96NC0 199 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 DHX35Q9H5Z1 703 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 ABCF3Q9NUQ8 709 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 IL10P22301 178 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 RABGAP1LQ5R372 815 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 C12orf60Q5U649 245 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ROPN1BQ9BZX4 212 aaPredicted RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 RANBP17Q9H2T7 1088 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 ROPN1Q9HAT0 212 aaPredicted RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 AGPAT5Q9NUQ2 364 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 COL15A1P39059 1388 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 GNAT1P11488 350 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 SCARF1Q14162 830 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 GFM2Q969S9 779 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 ASPSCR1Q9BZE9 553 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ZNF609O15014 1411 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 UCHL3P15374 230 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 ELF1P32519 619 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 TSPY1Q01534 308 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 KYAT1Q16773 422 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 EDRF1Q3B7T1 1238 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 MMGT1Q8N4V1 131 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 HNRNPLLQ8WVV9 542 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 EML4Q9HC35 981 aaKnown RBP13.86□□□□□ -0.19
TNC-212ENST00000542877 ARHGAP26Q9UNA1 814 aa13.86□□□□□ -0.19
TNC-212ENST00000542877 RBM15Q96T37 977 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNC-212ENST00000542877 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 TEKT2Q9UIF3 430 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 ARHGEF40Q8TER5 1519 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 NMT1P30419 496 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 LSP1P33241 339 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 C1orf228Q6PIY5 440 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 RBM12Q9NTZ6 932 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 ZFATQ9P243 1243 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 TMCC1O94876 653 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 RNF217Q8TC41 542 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 RAPGEF5Q92565 580 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 TSSK1BQ9BXA7 367 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 CCDC90BQ9GZT6 254 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 HACD3Q9P035 362 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 PCDHA10Q9Y5I2 948 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 STXBP3O00186 592 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 ACTR2P61160 394 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 FASTKD1Q53R41 847 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 NOP9Q86U38 636 aaKnown RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 GCNAQ96QF7 691 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 LMCD1Q9NZU5 365 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 PSMC3IPQ9P2W1 217 aaPredicted RBP13.85□□□□□ -0.19
TNC-212ENST00000542877 IQGAP3Q86VI3 1631 aa13.85□□□□□ -0.19
TNC-212ENST00000542877 HECW2Q9P2P5 1572 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 HNRNPCL2B2RXH8 293 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 AP3B1O00203 1094 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 FMO5P49326 533 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 PRAMEP78395 509 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 TRADDQ15628 312 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 CEP55Q53EZ4 464 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 OR9Q1Q8NGQ5 310 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 TEX12Q9BXU0 123 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 ZNF212Q9UDV6 495 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 FAM47DPA6NHR8 397 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 TBX3O15119 743 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 CCND1P24385 295 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 EFNA5P52803 228 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 P3H1Q32P28 736 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 ANKMY2Q8IV38 441 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 PHF20L1A8MW92 1017 aa13.84□□□□□ -0.19
TNC-212ENST00000542877 NBPF20Q3BBV1 942 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms