RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DEPDC5O75140 1603 aa6.85□□□□□ -1.31
XRCC4-206ENST00000542685 NKTRP30414 1462 aaKnown RBP6.85□□□□□ -1.31
XRCC4-206ENST00000542685 PRG4Q92954 1404 aaPredicted RBP6.84□□□□□ -1.31
XRCC4-206ENST00000542685 F2P00734 622 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TPM3P06753 285 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 NEFHP12036 1026 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TUBA3CQ13748 450 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 ELAVL1Q15717 326 aaKnown RBP6.84□□□□□ -1.31
XRCC4-206ENST00000542685 KIAA1841Q6NSI8 718 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TUBA3EQ6PEY2 450 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 KANSL1Q7Z3B3 1105 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 CCDC91Q7Z6B0 441 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 LRRTM3Q86VH5 581 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 ZZZ3Q8IYH5 903 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TRMT2AQ8IZ69 625 aaKnown RBP6.84□□□□□ -1.31
XRCC4-206ENST00000542685 KRT222Q8N1A0 295 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 OTUD6BQ8N6M0 293 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 PIBF1Q8WXW3 757 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 APPBP2Q92624 585 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TCF25Q9BQ70 676 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 ORAI3Q9BRQ5 295 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 HAPLN2Q9GZV7 340 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 THG1LQ9NWX6 298 aaKnown RBP6.84□□□□□ -1.31
XRCC4-206ENST00000542685 TRPM2O94759 1503 aa6.84□□□□□ -1.31
XRCC4-206ENST00000542685 NUP155O75694 1391 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 KANK1Q14678 1352 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 GOLIM4O00461 696 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 VSIG10L2P0DP72 767 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 MCM7P33993 719 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 DDIT3P35638 169 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 GAGE13Q4V321 117 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 Q6ZRM9 215 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 C16orf86Q6ZW13 317 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 KIF18BQ86Y91 864 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 TMPRSS6Q8IU80 811 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 GSPT2Q8IYD1 628 aaKnown RBP6.83□□□□□ -1.32
XRCC4-206ENST00000542685 GPATCH11Q8N954 259 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 MIEF2Q96C03 454 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 NOL10Q9BSC4 688 aaKnown RBP6.83□□□□□ -1.32
XRCC4-206ENST00000542685 PITHD1Q9GZP4 211 aaPredicted RBP6.83□□□□□ -1.32
XRCC4-206ENST00000542685 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 SPTLC3Q9NUV7 552 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 CWC15Q9P013 229 aaKnown RBP6.83□□□□□ -1.32
XRCC4-206ENST00000542685 CEP72Q9P209 647 aa6.83□□□□□ -1.32
XRCC4-206ENST00000542685 CFDP1Q9UEE9 299 aaPredicted RBP6.83□□□□□ -1.32
XRCC4-206ENST00000542685 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 CGNL1Q0VF96 1302 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 IFT172Q9UG01 1749 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 PLA2R1Q13018 1463 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 SCAF11Q99590 1463 aaKnown RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 A0A0A6YYJ9 748 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 ST20-MTHFSA0A0A6YYL1 179 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 DHX16O60231 1041 aaKnown RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 OPHN1O60890 802 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 SCNN1GP51170 649 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 DSG1Q02413 1049 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 RABEP1Q15276 862 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 TMED8Q6PL24 325 aaPredicted RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 SMC5Q8IY18 1101 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 EFHBQ8N7U6 833 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 NINJ1Q92982 152 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 SNX21Q969T3 373 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 TESK2Q96S53 571 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF703Q9H7S9 590 aaPredicted RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 PARPBPQ9NWS1 579 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 REXO2Q9Y3B8 237 aaKnown RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 INO80Q9ULG1 1556 aaPredicted RBP6.82□□□□□ -1.32
XRCC4-206ENST00000542685 PLEKHH1Q9ULM0 1364 aa6.82□□□□□ -1.32
XRCC4-206ENST00000542685 ARAP3Q8WWN8 1544 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 SHPRHQ149N8 1683 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 ADGRL1O94910 1474 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 FAM83GA6ND36 823 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 PCDH8O95206 1070 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 JUNP05412 331 aaKnown RBP6.81□□□□□ -1.32
XRCC4-206ENST00000542685 CD40P25942 277 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 CASQ1P31415 396 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 KIR2DL3P43628 341 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 PCBP1Q15365 356 aaKnown RBP eCLIP6.81□□□□□ -1.32
XRCC4-206ENST00000542685 FKBP15Q5T1M5 1219 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 FNDC7Q5VTL7 733 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 FAM43BQ6ZT52 329 aaPredicted RBP6.81□□□□□ -1.32
XRCC4-206ENST00000542685 GAS2L3Q86XJ1 694 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 PASD1Q8IV76 773 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 HSCBQ8IWL3 235 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 NIM1KQ8IY84 436 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 TXLNBQ8N3L3 684 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 ARL8AQ96BM9 186 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 MMRN2Q9H8L6 949 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 C14orf93Q9H972 538 aaKnown RBP6.81□□□□□ -1.32
XRCC4-206ENST00000542685 PANK3Q9H999 370 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 TET3O43151 1660 aa6.81□□□□□ -1.32
XRCC4-206ENST00000542685 ZNF644Q9H582 1327 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 ERCC6Q03468 1493 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 PLB1Q6P1J6 1458 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 A0A0A6YYK5 440 aaPredicted RBP6.8□□□□□ -1.32
XRCC4-206ENST00000542685 LOC102724159A0A0B4J2E5 919 aa6.8□□□□□ -1.32
XRCC4-206ENST00000542685 CCDC196A0A1B0GTZ2 297 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms