RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 NR3C1P04150 777 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CHMP4BP1P59074 171 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ENPEPQ07075 957 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KCNA1Q09470 495 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 HIC1Q14526 733 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SLFN12LQ6IEE8 588 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 GDF6Q6KF10 455 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 DMAC2Q9NW81 257 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MAGEC2Q9UBF1 373 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SLC4A7Q9Y6M7 1214 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MAP1BP46821 2468 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 COL4A6Q14031 1691 aa13.44□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CNTNAP2Q9UHC6 1331 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ARVCFO00192 962 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 GPR32O75388 356 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 VTNP04004 478 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PRKCBP05771 671 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TPM3P06753 285 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SRGAP2CP0DJJ0 459 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CYP2C18P33260 490 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 LIG4P49917 911 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CDK7P50613 346 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CRYBB1P53674 252 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 NLRP11P59045 1033 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PPP2R3AQ06190 1150 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 RBL2Q08999 1139 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ADAM9Q13443 819 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PTGISQ16647 500 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KSR1Q8IVT5 923 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FAM49AQ9H0Q0 323 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ADAMTS10Q9H324 1103 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 METTL14Q9HCE5 456 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KIAA1586Q9HCI6 787 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 USP24Q9UPU5 2620 aa13.43□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 A0A087WZ62 844 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KCNJ18B7U540 433 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TOM1L1O75674 476 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 LDHAP00338 332 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TPM2P07951 284 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ATP2A2P16615 1042 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SFPQP23246 707 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 AXLP30530 894 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ID4P47928 161 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MRPS6P82932 125 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TAP1Q03518 808 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KCNJ12Q14500 433 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TSHZ1Q6ZSZ6 1077 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 APBB1IPQ7Z5R6 666 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FRMD5Q7Z6J6 570 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 DNAJB3Q8WWF6 145 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 BICD1Q96G01 975 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FDXACB1Q9BRP7 624 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 NOD1Q9Y239 953 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FRMD4BQ9Y2L6 1034 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 TRPV2Q9Y5S1 764 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SQORQ9Y6N5 450 aa13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 SETXQ7Z333 2677 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MED19A0JLT2 244 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ERLIN2O94905 339 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 DARSP14868 501 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KCNA5P22460 613 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PROZP22891 400 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 EIF4BP23588 611 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PSMC2P35998 433 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 MCCD1P59942 119 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FANCCQ00597 558 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 ZP2Q05996 745 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 KYAT1Q16773 422 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FILIP1LQ4L180 1135 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 FAM26DQ5JW98 314 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 BMP8AQ7Z5Y6 402 aa13.41□□□□□ -0.26
CACNA1C-IT3-201ENST00000542680 USP37Q86T82 979 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms