RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MKNK1Q9BUB5 465 aa25.16■■□□□ 1.62
HOMER3-205ENST00000542541 MTIF3Q9H2K0 278 aaKnown RBP25.16■■□□□ 1.62
HOMER3-205ENST00000542541 NXF3Q9H4D5 531 aaKnown RBP25.16■■□□□ 1.62
HOMER3-205ENST00000542541 UBN1Q9NPG3 1134 aa25.16■■□□□ 1.62
HOMER3-205ENST00000542541 PCDHB7Q9Y5E2 793 aa25.16■■□□□ 1.62
HOMER3-205ENST00000542541 TET1Q8NFU7 2136 aa25.16■■□□□ 1.62
HOMER3-205ENST00000542541 GOLGA8IPA6NC78 632 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 GOLGA8JA6NMD2 632 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 MAPK13O15264 365 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 FAM189A1O60320 539 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 GNA14O95837 355 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 SNRNP35Q16560 246 aaKnown RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 TMEM240Q5SV17 173 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 OTOP2Q7RTS6 562 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 CEP120Q8N960 986 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 FAM200AQ8TCP9 573 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 RPF1Q9H9Y2 349 aaKnown RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 TOPORSQ9NS56 1045 aaPredicted RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 TMEM161AQ9NX61 479 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 CPSF3Q9UKF6 684 aaKnown RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 LRFN2Q9ULH4 789 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 NFE2L3Q9Y4A8 694 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 HES2Q9Y543 173 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 CEP290O15078 2479 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 RBAK-RBAKDNI3L0D1 243 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 AMHP03971 560 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 EPB41P11171 864 aaKnown RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 MAGEA10P43363 369 aaPredicted RBP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 KCNJ6P48051 423 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 SEZ6Q53EL9 994 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 AOPEPQ8N6M6 819 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 RDH13Q8NBN7 331 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 RNF169Q8NCN4 708 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.15■■□□□ 1.62
HOMER3-205ENST00000542541 THAP9Q9H5L6 903 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 SNTG2Q9NY99 539 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 PARP2Q9UGN5 583 aa25.15■■□□□ 1.62
HOMER3-205ENST00000542541 SLC16A3O15427 465 aaKnown RBP25.14■■□□□ 1.61
HOMER3-205ENST00000542541 EPHB4P54760 987 aa25.14■■□□□ 1.61
HOMER3-205ENST00000542541 CRELD2Q6UXH1 353 aaPredicted RBP25.14■■□□□ 1.61
HOMER3-205ENST00000542541 ZNF598Q86UK7 904 aaKnown RBP25.14■■□□□ 1.61
HOMER3-205ENST00000542541 CBWD2Q8IUF1 395 aa25.14■■□□□ 1.61
HOMER3-205ENST00000542541 FAM114A1Q8IWE2 563 aa25.14■■□□□ 1.61
HOMER3-205ENST00000542541 APOL6Q9BWW8 343 aa25.14■■□□□ 1.61
HOMER3-205ENST00000542541 CBX8Q9HC52 389 aa25.14■■□□□ 1.61
HOMER3-205ENST00000542541 AKAP3O75969 853 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 IBSPP21815 317 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-205ENST00000542541 TNFSF9P41273 254 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 CASP4P49662 377 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 ZBTB41Q5SVQ8 909 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 USP37Q86T82 979 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 FAM186BQ8IYM0 893 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 ZSWIM2Q8NEG5 633 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 HERVK_113Q902F9 699 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 PLEKHA5Q9HAU0 1116 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 METTL14Q9HCE5 456 aaKnown RBP25.13■■□□□ 1.61
HOMER3-205ENST00000542541 RBAKQ9NYW8 714 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-205ENST00000542541 GIT1Q9Y2X7 761 aa25.13■■□□□ 1.61
HOMER3-205ENST00000542541 ZBBXA8MT70 800 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 WDR5P61964 334 aaKnown RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 IQCB1Q15051 598 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 NPAS4Q8IUM7 802 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 CD302Q8IX05 232 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 RNF39Q9H2S5 420 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 H0YGN5 161 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 HOXA2O43364 376 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 RECQL4O94761 1208 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 ATF7P17544 494 aaPredicted RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 AKAP5P24588 427 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 TPM4P67936 248 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 MLLT1Q03111 559 aaPredicted RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 SURF1Q15526 300 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 ENOX2Q16206 610 aaKnown RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 CCDC40Q4G0X9 1142 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 INTS8Q75QN2 995 aaKnown RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 BRSK2Q8IWQ3 736 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 DHX40Q8IX18 779 aaKnown RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 TMEM192Q8IY95 271 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 MFSD14AQ96MC6 490 aa25.12■■□□□ 1.61
HOMER3-205ENST00000542541 MAGEC2Q9UBF1 373 aaPredicted RBP25.12■■□□□ 1.61
HOMER3-205ENST00000542541 GOLGA6L19H0YKK7 550 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 IL18RAPO95256 599 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 KRT13P13646 458 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 NCAPHQ15003 741 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 AGMOQ6ZNB7 445 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 FRMD5Q7Z6J6 570 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 RSPH1Q8WYR4 309 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 LPPQ93052 612 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 ASB7Q9H672 318 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 RSAD1Q9HA92 442 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 FANCLQ9NW38 375 aa25.11■■□□□ 1.61
HOMER3-205ENST00000542541 ARMCX3Q9UH62 379 aaPredicted RBP25.11■■□□□ 1.61
HOMER3-205ENST00000542541 CXCL8P10145 99 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 PPP2R3AQ06190 1150 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 CYP24A1Q07973 514 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 SLC10A6Q3KNW5 377 aa25.1■■□□□ 1.61
HOMER3-205ENST00000542541 GLB1LQ6UWU2 654 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms