RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 AHCYL2Q96HN2 611 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 CHMP4AQ9BY43 222 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 QRSL1Q9H0R6 528 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 EPC1Q9H2F5 836 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 IKZF4Q9H2S9 585 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 ZNF768Q9H5H4 540 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 BCO1Q9HAY6 547 aa4.96□□□□□ -1.62
LEMD3-204ENST00000542032 REXO2Q9Y3B8 237 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 WDR33Q9C0J8 1336 aaKnown RBP4.96□□□□□ -1.62
LEMD3-204ENST00000542032 CADPSQ9ULU8 1353 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 PRR5-ARHGAP8B1AHC4 643 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 DIRC3C9JPN6 131 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 LEFTY2O00292 366 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 PJA2O43164 708 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 RPS6KA4O75676 772 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 RECQL4O94761 1208 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 ZSCAN20P17040 1043 aaPredicted RBP4.95□□□□□ -1.62
LEMD3-204ENST00000542032 SCAND1P57086 179 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 FAM189BP81408 668 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 PDZD4Q76G19 769 aaPredicted RBP4.95□□□□□ -1.62
LEMD3-204ENST00000542032 OR7D4Q8NG98 312 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 MYEOVQ96EZ4 313 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 DCLRE1CQ96SD1 692 aaKnown RBP4.95□□□□□ -1.62
LEMD3-204ENST00000542032 GREM2Q9H772 168 aa4.95□□□□□ -1.62
LEMD3-204ENST00000542032 CCM2LQ9NUG4 571 aaPredicted RBP4.95□□□□□ -1.62
LEMD3-204ENST00000542032 TMEM200CA6NKL6 621 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 FOXN1O15353 648 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 AKR1B10O60218 316 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 PPFIA4O75335 1185 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 SCAF4O95104 1147 aaKnown RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 ALOX15P16050 662 aaPredicted RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 CANXP27824 592 aaKnown RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 GUCY1A2P33402 732 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 SREBF1P36956 1147 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 MCAMP43121 646 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 SRSF2Q01130 221 aaKnown RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 MUM1L1Q5H9M0 696 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 TOR2AQ5JU69 321 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 GDF7Q7Z4P5 450 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 MRGPRGQ86SM5 289 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 SLC35B2Q8TB61 432 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 CPT1CQ8TCG5 803 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 COG1Q8WTW3 980 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 CEP89Q96ST8 783 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 MLST8Q9BVC4 326 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 ZNF277Q9NRM2 450 aaPredicted RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 RBM12Q9NTZ6 932 aaKnown RBP4.94□□□□□ -1.62
LEMD3-204ENST00000542032 HDAC5Q9UQL6 1122 aa4.94□□□□□ -1.62
LEMD3-204ENST00000542032 GAGE12BA1L429 117 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 GAGE12HA6NDE8 117 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 TRIM75PA6NK02 468 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 CXorf49A8MYA2 514 aaPredicted RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 MGAT1P26572 445 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 CNGA1P29973 690 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 ADSLP30566 484 aaPredicted RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 CCT2P78371 535 aaKnown RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 COL10A1Q03692 680 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 MALLQ13021 153 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 SP140Q13342 867 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 INAVAQ3KP66 663 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 FAM102AQ5T9C2 384 aaPredicted RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 REPS2Q8NFH8 660 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 OR10H5Q8NGA6 315 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 NEU1Q99519 415 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 ACE2Q9BYF1 805 aaPredicted RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 FAM30AQ9NZY2 134 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 EIF2B4Q9UI10 523 aaKnown RBP4.93□□□□□ -1.62
LEMD3-204ENST00000542032 SIK3Q9Y2K2 1263 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 PNPLA7Q6ZV29 1317 aa4.93□□□□□ -1.62
LEMD3-204ENST00000542032 A0A087X1B8 175 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 CENPVL1A0A0U1RR11 272 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 MARCH11A6NNE9 402 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 PPM1GO15355 546 aaPredicted RBP4.92□□□□□ -1.62
LEMD3-204ENST00000542032 RBP3P10745 1247 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 ECHS1P30084 290 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 SLC5A3P53794 718 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 NHLH2Q02577 135 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 MGAT2Q10469 447 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 SEPT2Q15019 361 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 EFCAB12Q6NXP0 572 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 DDX42Q86XP3 938 aaKnown RBP eCLIP4.92□□□□□ -1.62
LEMD3-204ENST00000542032 SYNE4Q8N205 404 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 ZFP28Q8NHY6 868 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 TFAP2CQ92754 450 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 AGAP2Q99490 1192 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 SPON1Q9HCB6 807 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 DNAJC28Q9NX36 388 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 DMRT1Q9Y5R6 373 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
LEMD3-204ENST00000542032 GRID2IPA4D2P6 1211 aa4.91□□□□□ -1.62
LEMD3-204ENST00000542032 TMEM191CA6NGB0 347 aa4.91□□□□□ -1.62
LEMD3-204ENST00000542032 DRGXA6NNA5 263 aa4.91□□□□□ -1.62
LEMD3-204ENST00000542032 RNASET2O00584 256 aaKnown RBP4.91□□□□□ -1.62
LEMD3-204ENST00000542032 ZNF185O15231 689 aa4.91□□□□□ -1.62
LEMD3-204ENST00000542032 ABHD16AO95870 558 aa4.91□□□□□ -1.62
LEMD3-204ENST00000542032 SNRPA1P09661 255 aaKnown RBP4.91□□□□□ -1.62
LEMD3-204ENST00000542032 LAG3P18627 525 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms