RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 VPS45Q9NRW7 570 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 KANSL3Q9P2N6 904 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
CHFR-220ENST00000541817 NCANO14594 1321 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 MEIS1O00470 390 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 DCLK1O15075 740 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 CAPNS1P04632 268 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 HNRNPA1P09651 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHFR-220ENST00000541817 CEACAM1P13688 526 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 RXRAP19793 462 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 SFPQP23246 707 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHFR-220ENST00000541817 MLH1P40692 756 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 RAB27AP51159 221 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 FGD1P98174 961 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 CREB5Q02930 508 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 UGCGQ16739 394 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 FAM78AQ5JUQ0 283 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 UBXN11Q5T124 520 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 PKN3Q6P5Z2 889 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 VITQ6UXI7 678 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 CEP57Q86XR8 500 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 CHCHD4Q8N4Q1 142 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 TCEAL4Q96EI5 215 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 COLEC11Q9BWP8 271 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 APOL6Q9BWW8 343 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 SPZ1Q9BXG8 430 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 LNPKQ9C0E8 428 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHFR-220ENST00000541817 SAMM50Q9Y512 469 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 HES2Q9Y543 173 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 FREM2Q5SZK8 3169 aa10.95□□□□□ -0.66
CHFR-220ENST00000541817 MAST4O15021 2626 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 ARL5CA6NH57 179 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 SLC38A8A6NNN8 435 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 PATE3B3GLJ2 98 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 FAM86B1E9PN63 330 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 PSAPP07602 524 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 RHOP08100 348 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 FAM86B2P0C5J1 330 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 SDSP20132 328 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 VIPR2P41587 438 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 PDE1AP54750 535 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
CHFR-220ENST00000541817 PRKCEQ02156 737 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 MTERF2Q49AM1 385 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
CHFR-220ENST00000541817 TXNDC11Q6PKC3 985 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 HEATR3Q7Z4Q2 680 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 MAP4K3Q8IVH8 894 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 SMG8Q8ND04 991 aaKnown RBP10.94□□□□□ -0.66
CHFR-220ENST00000541817 IRF7Q92985 503 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 CRELD1Q96HD1 420 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 NLRP4Q96MN2 994 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 ZSWIM3Q96MP5 696 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 PAAF1Q9BRP4 392 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 ZFP14Q9HCL3 533 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 ATG2BQ96BY7 2078 aa10.94□□□□□ -0.66
CHFR-220ENST00000541817 ERICH2A1L162 156 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 CDX4O14627 284 aaPredicted RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 PAPSS2O95340 614 aaPredicted RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 CAVIN2O95810 425 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 OATP04181 439 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 ITGA4P13612 1032 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 NT5C2P49902 561 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 DSC1Q08554 894 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 SCAPQ12770 1279 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 PLK5Q496M5 336 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 GLIS3Q8NEA6 775 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 ANO3Q9BYT9 981 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 DUSP15Q9H1R2 295 aaPredicted RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 MINDY3Q9H8M7 445 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 AGPAT5Q9NUQ2 364 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 CACNA2D2Q9NY47 1150 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 ADAM28Q9UKQ2 775 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 KCNH3Q9ULD8 1083 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 INVSQ9Y283 1065 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 PCDHGA5Q9Y5G8 931 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 PCDHA10Q9Y5I2 948 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
CHFR-220ENST00000541817 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
CHFR-220ENST00000541817 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 TADA2AO75478 443 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 C1RP00736 705 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 GJA1P17302 382 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 CSRP1P21291 193 aaKnown RBP10.92□□□□□ -0.66
CHFR-220ENST00000541817 HOXA9P31269 272 aa10.92□□□□□ -0.66
CHFR-220ENST00000541817 C19orf57Q0VDD7 668 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms