RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 GANQ9H2C0 597 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PLEKHA4Q9H4M7 779 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 SMIM35A0A1B0GVV1 85 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 C17orf102A2RUQ5 167 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 HARSP12081 509 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 GCLMP48507 274 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ACOT2P49753 483 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 GPC3P51654 580 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 NKX3-2P78367 333 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 PPP3CAQ08209 521 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 MAP3K21Q5TCX8 1036 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 TSHZ1Q6ZSZ6 1077 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ZNF410Q86VK4 478 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 SIX2Q9NPC8 291 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 HDAC6Q9UBN7 1215 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 FEZ2Q9UHY8 353 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 A0A0U1RQJ8 604 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 P4HA2O15460 535 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 B4GALT5O43286 388 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 PHACTR2O75167 634 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 MYCNP04198 464 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 IQCF3P0C7M6 154 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 GNAT1P11488 350 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 MXI1P50539 228 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ADAM17P78536 824 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 CDC42EP1Q00587 391 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ENPEPQ07075 957 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 FAM187BQ17R55 369 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ATF7IP2Q5U623 682 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 KLHDC7AQ5VTJ3 777 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ZBTB33Q86T24 672 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ATRIPQ8WXE1 791 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 PLAGL2Q9UPG8 496 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 TRIP12Q14669 1992 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 LRRIQ3A6PVS8 624 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 TREHO43280 583 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 LRRN2O75325 713 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 CSDE1O75534 798 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 PNMA6AP0CW24 399 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 UCHL3P15374 230 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 HNRNPH3P31942 346 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 HIC1Q14526 733 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 PDXDC1Q6P996 788 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 CRELD2Q6UXH1 353 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 RUFY4Q6ZNE9 571 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 NYAP1Q6ZVC0 841 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 POP1Q99575 1024 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 CARD6Q9BX69 1037 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 AJAP1Q9UKB5 411 aaPredicted RBP9.41□□□□□ -0.9
THBS3-210ENST00000541576 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
THBS3-210ENST00000541576 PLEKP08567 350 aaPredicted RBP9.4□□□□□ -0.9
THBS3-210ENST00000541576 PROZP22891 400 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 PRMT2P55345 433 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 MCL1Q07820 350 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 TMEM62Q0P6H9 643 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 KIZQ2M2Z5 673 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 ZBTB41Q5SVQ8 909 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 GJB7Q6PEY0 223 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 MPZL3Q6UWV2 235 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 SRGAP1Q7Z6B7 1085 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 FNBP1Q96RU3 617 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.9
THBS3-210ENST00000541576 PTPRHQ9HD43 1115 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 DDX20Q9UHI6 824 aaKnown RBP9.4□□□□□ -0.9
THBS3-210ENST00000541576 GINS2Q9Y248 185 aa9.4□□□□□ -0.9
THBS3-210ENST00000541576 ABLIM1O14639 778 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 PMM2O15305 246 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 HOXC8P31273 242 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 GTF2H1P32780 548 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 ZNF200P98182 395 aaPredicted RBP9.4□□□□□ -0.91
THBS3-210ENST00000541576 PSMD6Q15008 389 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 AMHR2Q16671 573 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 ZNF568Q3ZCX4 644 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 KRT39Q6A163 491 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 SLAIN1Q8ND83 568 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 ACRBPQ8NEB7 543 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 DNAJB3Q8WWF6 145 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 FAM84AQ96KN4 292 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 FBXL5Q9UKA1 691 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 TNFSF13BQ9Y275 285 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 REXO2Q9Y3B8 237 aaKnown RBP9.4□□□□□ -0.91
THBS3-210ENST00000541576 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 EPN1Q9Y6I3 576 aaPredicted RBP9.4□□□□□ -0.91
THBS3-210ENST00000541576 CNTNAP2Q9UHC6 1331 aa9.4□□□□□ -0.91
THBS3-210ENST00000541576 OGTO15294 1046 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 CCP110O43303 1012 aa9.39□□□□□ -0.91
THBS3-210ENST00000541576 ERLIN2O94905 339 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms