RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MRPS25P82663 173 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 RAPGEF1Q13905 1077 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 KLHDC7AQ5VTJ3 777 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 AJAP1Q9UKB5 411 aaPredicted RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 ANO9A1A5B4 782 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 IPO7O95373 1038 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 GCLMP48507 274 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 MYL7Q01449 175 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 PPP3CAQ08209 521 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.235e-7■■■□□ 15.9
CLPTM1-202ENST00000541297 RNF149Q8NC42 400 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 PPP1R13LQ8WUF5 828 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 TMEM174Q8WUU8 243 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 EMID1Q96A84 441 aaPredicted RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 POP1Q99575 1024 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 C16orf70Q9BSU1 422 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 TARS2Q9BW92 718 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 ANKFY1Q9P2R3 1169 aa16.51■□□□□ 0.23
CLPTM1-202ENST00000541297 DYNC1LI2O43237 492 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 LRRN2O75325 713 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 MMP3P08254 477 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 IER5Q5VY09 327 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 NLRP4Q96MN2 994 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 PPP1R16BQ96T49 567 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.5■□□□□ 0.237e-11■■■■■ 260.8
CLPTM1-202ENST00000541297 SUCLA2Q9P2R7 463 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 DMGDHQ9UI17 866 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 IGKV6-21A0A0C4DH24 114 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 TTLL13PA6NNM8 815 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 C1orf220Q5T0J3 134 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 IQSEC1Q6DN90 963 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 CREG2Q8IUH2 290 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 CCDC42Q96M95 316 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 LRRC1Q9BTT6 524 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 CAPS2Q9BXY5 557 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 EDEM3Q9BZQ6 932 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 PLCB1Q9NQ66 1216 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 KCNG1Q9UIX4 513 aa16.5■□□□□ 0.23
CLPTM1-202ENST00000541297 H3BRB1 525 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 ADCY3O60266 1144 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 EIF4A3P38919 411 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 KIF5AQ12840 1032 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 TDRD12Q587J7 1177 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 TTC19Q6DKK2 380 aaPredicted RBP16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 CCDC170Q8IYT3 715 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 SPAG5Q96R06 1193 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 HAPLN2Q9GZV7 340 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 ZNF263O14978 683 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 TM4SF4P48230 202 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 LIG3P49916 1009 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 PPFIA1Q13136 1202 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 BCAS4Q8TDM0 211 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 USP6NLQ92738 828 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 FAM84AQ96KN4 292 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 PPME1Q9Y570 386 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
CLPTM1-202ENST00000541297 EBAG9O00559 213 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 AOC2O75106 756 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 C22orf31O95567 290 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 KLRC1P26715 233 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 RGS2P41220 211 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 ACOT2P49753 483 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 CCDC70Q6NSX1 233 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 SNX12Q9UMY4 172 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 HOXC6P09630 235 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 DLATP10515 647 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 GARTP22102 1010 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 VAV2P52735 878 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 CDK17Q00537 523 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 MXD4Q14582 209 aaPredicted RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 HGSNATQ68CP4 663 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 MMGT1Q8N4V1 131 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 INTS2Q9H0H0 1204 aaKnown RBP16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 CEP350Q5VT06 3117 aa16.48■□□□□ 0.23
CLPTM1-202ENST00000541297 CA12O43570 354 aa16.47■□□□□ 0.23
CLPTM1-202ENST00000541297 GAS2O43903 313 aaKnown RBP16.47■□□□□ 0.23
CLPTM1-202ENST00000541297 ABCD1P33897 745 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms