RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 GOLGA8RI6L899 631 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 RIPK2O43353 540 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 DGKIO75912 1065 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 MT-ND3P03897 115 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 GLI1P08151 1106 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 SLC3A2P08195 630 aaKnown RBP6.59□□□□□ -1.36
LMO3-225ENST00000541295 IFNA8P32881 189 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 GSDMDP57764 484 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 IFIT5Q13325 482 aaKnown RBP6.59□□□□□ -1.36
LMO3-225ENST00000541295 MCTP1Q6DN14 999 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 NAT8LQ8N9F0 302 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 SLC7A3Q8WY07 619 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 TCEANC2Q96MN5 208 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 PLIN2Q99541 437 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 B3GNT4Q9C0J1 378 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 GOLPH3LQ9H4A5 285 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 ZSWIM6Q9HCJ5 1215 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 NLRC4Q9NPP4 1024 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 TBCCD1Q9NVR7 557 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 FANCLQ9NW38 375 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 KIF17Q9P2E2 1029 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 AMACRQ9UHK6 382 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 SAP30BPQ9UHR5 308 aaKnown RBP6.59□□□□□ -1.36
LMO3-225ENST00000541295 PALD1Q9ULE6 856 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 PYCARDQ9ULZ3 195 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 SOX13Q9UN79 622 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 MED16Q9Y2X0 877 aa6.59□□□□□ -1.36
LMO3-225ENST00000541295 LRP6O75581 1613 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 WDR91A4D1P6 747 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CTAGE9A4FU28 777 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 SH3D21A4FU49 640 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 A6NHS1 94 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 BECN2A8MW95 431 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 NR1I2O75469 434 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CCDC192P0DO97 292 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 IL6STP40189 918 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 ACADVLP49748 655 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 NEK4P51957 841 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 MRPS5P82675 430 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 PICALMQ13492 652 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 MORC3Q14149 939 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 DEPDC1Q5TB30 811 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 BEND4Q6ZU67 534 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 SLC9B2Q86UD5 537 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 ZNF565Q8N9K5 539 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 ZNF579Q8NAF0 562 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 TTC8Q8TAM2 541 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CCDC127Q96BQ5 260 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 TRMT2BQ96GJ1 504 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 HS6ST2Q96MM7 605 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 DDX50Q9BQ39 737 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 NUSAP1Q9BXS6 441 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 SHCBP1LQ9BZQ2 653 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 GBA3Q9H227 469 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 SYNDIG1Q9H7V2 258 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CNNM1Q9NRU3 951 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 SLC8A2Q9UPR5 921 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 NIP7Q9Y221 180 aaKnown RBP eCLIP6.58□□□□□ -1.36
LMO3-225ENST00000541295 CAB39Q9Y376 341 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 FAM32AQ9Y421 112 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 BCL9LQ86UU0 1499 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 LOC105371267A0A1B0GV96 52 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CDK2AP1O14519 115 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 RAD51BO15315 384 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CCNT1O60563 726 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 S100A9P06702 114 aaKnown RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 HPGDP15428 266 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 GALNSP34059 522 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 ATN1P54259 1190 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 CACNB2Q08289 660 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 COTL1Q14019 142 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 CLUL1Q15846 466 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 MZT2AQ6P582 158 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 SLC51BQ86UW2 128 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 JAMLQ86YT9 394 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 ZBTB38Q8NAP3 1195 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 KIFC2Q96AC6 838 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 FAM227BQ96M60 508 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 TBCBQ99426 244 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 EHD1Q9H4M9 534 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 GREM2Q9H772 168 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 PALMDQ9NP74 551 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 PDP2Q9P2J9 529 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 GGA2Q9UJY4 613 aa6.58□□□□□ -1.36
LMO3-225ENST00000541295 FAF1Q9UNN5 650 aaPredicted RBP6.58□□□□□ -1.36
LMO3-225ENST00000541295 CCDC85CA6NKD9 419 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 PCP4L1A6NKN8 68 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 GOLGA8BA8MQT2 603 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 CAPN14A8MX76 684 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 EYA2O00167 538 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 ENPP3O14638 875 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 KPNA5O15131 536 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 SLC7A4O43246 635 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 GMNNO75496 209 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 CAPNS1P04632 268 aa6.57□□□□□ -1.36
LMO3-225ENST00000541295 PCCAP05165 728 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms