RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ZDHHC24Q6UX98 284 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 CBWD2Q8IUF1 395 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 ARHGEF19Q8IW93 802 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 KRT35Q92764 455 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 KAT5Q92993 513 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 MOV10L1Q9BXT6 1211 aaKnown RBP13.45□□□□□ -0.26
RNF4-222ENST00000541204 TMEM206Q9H813 350 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
RNF4-222ENST00000541204 KIAA0391O15091 583 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 ZNF862O60290 1169 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 DRD4P21917 467 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 DSG3P32926 999 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 IRX3P78415 501 aaPredicted RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 GHRHRQ02643 423 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 FSTL1Q12841 308 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 PPP2R5AQ15172 486 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 HOOK3Q86VS8 718 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 XXYLT1Q8NBI6 393 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 NSUN6Q8TEA1 469 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 XPO6Q96QU8 1125 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 AGPAT1Q99943 283 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 CNOT10Q9H9A5 744 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 A1CFQ9NQ94 594 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 CTTNBP2NLQ9P2B4 639 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 CHN1P15882 459 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 NPTX2P47972 431 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 SLC29A2Q14542 456 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 DENND2CQ68D51 928 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 CCDC91Q7Z6B0 441 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 REPS2Q8NFH8 660 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 KLRG1Q96E93 195 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 CHMP6Q96FZ7 201 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 SELENOSQ9BQE4 189 aa13.44□□□□□ -0.26
RNF4-222ENST00000541204 SEPT9Q9UHD8 586 aaPredicted RBP13.44□□□□□ -0.26
RNF4-222ENST00000541204 FAM187AA6NFU0 413 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 FTLP02792 175 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 ADRB2P07550 413 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 NUDT17P0C025 328 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 KIF22Q14807 665 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 PPP2R5EQ16537 467 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 LMO3Q8TAP4 145 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 HAUS2Q9NVX0 235 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 MAP3K20Q9NYL2 800 aaKnown RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 ZNF112Q9UJU3 913 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 MYH11P35749 1972 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 ADSSP30520 456 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 SFNP31947 248 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 RPL21P46778 160 aaKnown RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 CDR1P51861 262 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 CNTN2Q02246 1040 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 DMP1Q13316 513 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 ARMC9Q7Z3E5 817 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 SLC9A9Q8IVB4 645 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 CCDC60Q8IWA6 550 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 ZDHHC14Q8IZN3 488 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 NCAPGQ9BPX3 1015 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 FAM129AQ9BZQ8 928 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 SEMA4AQ9H3S1 761 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 AZI2Q9H6S1 392 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 KMT5AQ9NQR1 393 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 TOPORSQ9NS56 1045 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 GRHL1Q9NZI5 618 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 TBX20Q9UMR3 447 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 PHF2O75151 1096 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 LYPLA2O95372 231 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 MMEP08473 750 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 KCNA2P16389 499 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 PTGIRP43119 386 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 SCTRP47872 440 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 IFI35P80217 286 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 GTF2BQ00403 316 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 C1orf220Q5T0J3 134 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 TTC27Q6P3X3 843 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 CYFIP1Q7L576 1253 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 PRELID2Q8N945 189 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 GPATCH11Q8N954 259 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 TMEM161BQ8NDZ6 487 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 JPH1Q9HDC5 661 aaPredicted RBP13.43□□□□□ -0.26
RNF4-222ENST00000541204 GINM1Q9NU53 330 aa13.43□□□□□ -0.26
RNF4-222ENST00000541204 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms