RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 TMEM174Q8WUU8 243 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 SCFD1Q8WVM8 642 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 SEMA6BQ9H3T3 888 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 TYW1Q9NV66 732 aaKnown RBP20.49■□□□□ 0.87
VPS33A-205ENST00000541169 SLC38A7Q9NVC3 462 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 HES2Q9Y543 173 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 PCDHA5Q9Y5H7 936 aa20.49■□□□□ 0.87
VPS33A-205ENST00000541169 MRPL42Q9Y6G3 142 aaKnown RBP20.49■□□□□ 0.87
VPS33A-205ENST00000541169 RECQL4O94761 1208 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 PRPF6O94906 941 aaKnown RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 PRR29P0C7W0 189 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 AKAP5P24588 427 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 MLH1P40692 756 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 STK4Q13043 487 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 PAN2Q504Q3 1202 aaKnown RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 ZNF658Q5TYW1 1059 aaPredicted RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 THNSL1Q8IYQ7 743 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 GUF1Q8N442 669 aaKnown RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 ZBTB45Q96K62 511 aaPredicted RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 GAD1Q99259 594 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 TMEM175Q9BSA9 504 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 APOL6Q9BWW8 343 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 TBC1D13Q9NVG8 400 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 AGO2Q9UKV8 859 aaKnown RBP20.48■□□□□ 0.87
VPS33A-205ENST00000541169 INPP5FQ9Y2H2 1132 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 USP20Q9Y2K6 914 aa20.48■□□□□ 0.87
VPS33A-205ENST00000541169 THP07101 528 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 MYBPC2Q14324 1141 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 XKR4Q5GH76 650 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 ARMCX5Q6P1M9 558 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 SLC39A4Q6P5W5 647 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 C12orf56Q8IXR9 622 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 TRIML1Q8N9V2 468 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 FBXO22Q8NEZ5 403 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 HPS3Q969F9 1004 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 CWH43Q9H720 699 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 RPF1Q9H9Y2 349 aaKnown RBP20.47■□□□□ 0.87
VPS33A-205ENST00000541169 GDAQ9Y2T3 454 aa20.47■□□□□ 0.87
VPS33A-205ENST00000541169 NLRC5Q86WI3 1866 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 MEIS3P2A8K0S8 358 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 ANKRD63C9JTQ0 380 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 PDXKO00764 312 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 XPOTO43592 962 aaKnown RBP20.46■□□□□ 0.87
VPS33A-205ENST00000541169 ALDH2P05091 517 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 KCNE1P15382 129 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 CTNNB1P35222 781 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 UBE3AQ05086 875 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 KCNA1Q09470 495 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 STIM1Q13586 685 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 EPC2Q52LR7 807 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 ALKAL1Q6UXT8 129 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 DEFB123Q8N688 67 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 KIAA0895Q8NCT3 520 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 FGFBP2Q9BYJ0 223 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 ASB7Q9H672 318 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 LMCD1Q9NZU5 365 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 CNTN3Q9P232 1028 aa20.46■□□□□ 0.87
VPS33A-205ENST00000541169 TDRD15B5MCY1 1934 aaKnown RBP20.45■□□□□ 0.86
VPS33A-205ENST00000541169 H3BNC9 293 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 FAM189A1O60320 539 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 IL18RAPO95256 599 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 ADRB2P07550 413 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 LINC00271P0C7V0 271 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 HARSP12081 509 aaKnown RBP20.45■□□□□ 0.86
VPS33A-205ENST00000541169 ADSSP30520 456 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 GATMP50440 423 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 KRT17Q04695 432 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 PPP2R3AQ06190 1150 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 DSC1Q08554 894 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 KCNT2Q6UVM3 1135 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 LRRC55Q6ZSA7 311 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 COLGALT1Q8NBJ5 622 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 GSTCDQ8NEC7 633 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 SNX27Q96L92 541 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 UROC1Q96N76 676 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 LMAN2LQ9H0V9 348 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 TTYH1Q9H313 450 aaPredicted RBP20.45■□□□□ 0.86
VPS33A-205ENST00000541169 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 CPSF3Q9UKF6 684 aaKnown RBP20.45■□□□□ 0.86
VPS33A-205ENST00000541169 LZTS1Q9Y250 596 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 DERAQ9Y315 318 aa20.45■□□□□ 0.86
VPS33A-205ENST00000541169 CITO14578 2027 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 CALUO43852 315 aaPredicted RBP20.44■□□□□ 0.86
VPS33A-205ENST00000541169 EXTL3O43909 919 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 HOXD13P35453 343 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 OSTNP61366 133 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 TUSC3Q13454 348 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 BMS1Q14692 1282 aaKnown RBP20.44■□□□□ 0.86
VPS33A-205ENST00000541169 PTPROQ16827 1216 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 NT5DC4Q86YG4 428 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 SLC9A9Q8IVB4 645 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 GPD1LQ8N335 351 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 ARNTL2Q8WYA1 636 aa20.44■□□□□ 0.86
VPS33A-205ENST00000541169 DDX27Q96GQ7 796 aaKnown RBP20.44■□□□□ 0.86
VPS33A-205ENST00000541169 ZFP42Q96MM3 310 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms