RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CCDC94Q9BW85 323 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 LRRC27Q9C0I9 530 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 MRPL44Q9H9J2 332 aaKnown RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 ENTPD7Q9NQZ7 604 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 PANK4Q9NVE7 773 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 KBTBD4Q9NVX7 518 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 SEL1LQ9UBV2 794 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 LZTS1Q9Y250 596 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 FAN1Q9Y2M0 1017 aa10.11□□□□□ -0.79
SNHG1-215ENST00000540904 PRG3Q9Y2Y8 225 aaPredicted RBP10.11□□□□□ -0.79
SNHG1-215ENST00000540904 PRRC2BQ5JSZ5 2229 aaKnown RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 A0A1B0GVL5 298 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CARNS1A5YM72 827 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ABLIM1O14639 778 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 PTGESO14684 152 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 NRP1O14786 923 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 NR1I2O75469 434 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 GCNT3O95395 438 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 THP07101 528 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 PFKFB1P16118 471 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CMA1P23946 247 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ABCD1P33897 745 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CA8P35219 290 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 GRM5P41594 1212 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 AFMP43652 599 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 YARSP54577 528 aaKnown RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ASIC1P78348 528 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 GTF2BQ00403 316 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 TFF2Q03403 129 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 MCL1Q07820 350 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 DSC1Q08554 894 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 HYAL1Q12794 435 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 GRIK3Q13003 919 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 SEZ6Q53EL9 994 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 GLRA4Q5JXX5 417 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 PLPP4Q5VZY2 271 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ZNF720Q7Z2F6 126 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 TMC7Q7Z402 723 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 RBM23Q86U06 439 aaKnown RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CCDC65Q8IXS2 484 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CEP57L1Q8IYX8 460 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 BCL7CQ8WUZ0 217 aaPredicted RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 RABGGTAQ92696 567 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 KCNN1Q92952 543 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 HLA-CQ95604 372 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 PPP2R3CQ969Q6 453 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 PYM1Q9BRP8 204 aaKnown RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 TMEM175Q9BSA9 504 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 TRIM9Q9C026 710 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CXCL16Q9H2A7 254 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 MAGEF1Q9HAY2 307 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 TOPORSQ9NS56 1045 aaPredicted RBP10.1□□□□□ -0.79
SNHG1-215ENST00000540904 THEGQ9P2T0 379 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 CACNG4Q9UBN1 327 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 RALGAPA2Q2PPJ7 1873 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 ZMYM2Q9UBW7 1377 aa10.1□□□□□ -0.79
SNHG1-215ENST00000540904 MYH15Q9Y2K3 1946 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 FRMD3A2A2Y4 597 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 CASTOR2A6NHX0 329 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 F8W810 466 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 PER2O15055 1255 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 SLFN14P0C7P3 912 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 CASP1P29466 404 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 GTF2F1P35269 517 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNHG1-215ENST00000540904 NRIP1P48552 1158 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 CASP5P51878 434 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 COASYQ13057 564 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
SNHG1-215ENST00000540904 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
SNHG1-215ENST00000540904 MAP4K3Q8IVH8 894 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 VPS52Q8N1B4 723 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 ACAP3Q96P50 834 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 C7orf25Q9BPX7 421 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 HAPLN2Q9GZV7 340 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 BLZF1Q9H2G9 400 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 ST6GALNAC4Q9H4F1 302 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 NGRNQ9NPE2 291 aaKnown RBP10.09□□□□□ -0.79
SNHG1-215ENST00000540904 OLFML3Q9NRN5 406 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 SERTAD1Q9UHV2 236 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 COG5Q9UP83 839 aa10.09□□□□□ -0.79
SNHG1-215ENST00000540904 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 A0A0B4J269 797 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 SMIM28A0A1B0GU29 152 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 HIDE1A8MVS5 230 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 TISP43B9A030 160 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 FSCN2O14926 492 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 ACTN4O43707 911 aaKnown RBP10.08□□□□□ -0.8
SNHG1-215ENST00000540904 PPP1R37O75864 691 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 CXCL14O95715 111 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 PIGRP01833 764 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 MYBP10242 640 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 KCNA5P22460 613 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 SYKP43405 635 aa10.08□□□□□ -0.8
SNHG1-215ENST00000540904 NDUFA8P51970 172 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms