RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 RPL26L1Q9UNX3 145 aaKnown RBP10.37□□□□□ -0.75
CLDN2-202ENST00000540876 BCS1LQ9Y276 419 aa10.37□□□□□ -0.75
CLDN2-202ENST00000540876 UMODL1Q5DID0 1318 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MROH5Q6ZUA9 1318 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ANKRD31Q8N7Z5 1873 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 DDX3XO00571 662 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 DKC1O60832 514 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 UFL1O94874 794 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ALDH2P05091 517 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 NAA20P61599 178 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 PUM3Q15397 648 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 LONRF1Q17RB8 773 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 PATL1Q86TB9 770 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TBC1D10CQ8IV04 446 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 SCYL3Q8IZE3 742 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 SAMD3Q8N6K7 520 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ACTRT1Q8TDG2 376 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ERGIC2Q96RQ1 377 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 CRAMP1Q96RY5 1269 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ECSITQ9BQ95 431 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 NDEL1Q9GZM8 345 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 SLITRK6Q9H5Y7 841 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TBCCD1Q9NVR7 557 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 AIPL1Q9NZN9 384 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ZNF212Q9UDV6 495 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 BHMG1C9JSJ3 638 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 BBOX1O75936 387 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 BAG2O95816 211 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ACVR2BQ13705 512 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 THOC5Q13769 683 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 INAQ16352 499 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 PDCD4Q53EL6 469 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TAF1BQ53T94 588 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MIIPQ5JXC2 388 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 METTL13Q8N6R0 699 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MAGEB6Q8N7X4 407 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 ANKS1AQ92625 1134 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MCUR1Q96AQ8 359 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 CYTH2Q99418 400 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MIPEPQ99797 713 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 POLR3CQ9BUI4 534 aaPredicted RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 CADM1Q9BY67 442 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 NAPBQ9H115 298 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TBC1D30Q9Y2I9 924 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
CLDN2-202ENST00000540876 N6AMT1Q9Y5N5 214 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 MYH3P11055 1940 aa10.36□□□□□ -0.75
CLDN2-202ENST00000540876 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 FBP2O00757 339 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 FGFR2P21802 821 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 COPB2P35606 906 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 SPDYCQ5MJ68 293 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 LMBRD2Q68DH5 695 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 TTI2Q6NXR4 508 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 VSTM1Q6UX27 236 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 CROCCP2Q86T23 111 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 VPS52Q8N1B4 723 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 MIGA1Q8NAN2 632 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 FBXO25Q8TCJ0 367 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 TIMMDC1Q9NPL8 285 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 SYNPO2Q9UMS6 1093 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ATP6V0A2Q9Y487 856 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 FADS3Q9Y5Q0 445 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ZNF804BA4D1E1 1349 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 LAMB2P55268 1798 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 WDR46O15213 610 aaKnown RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 DCTN3O75935 186 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 EYA4O95677 639 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 MYCLP1P12525 358 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 BRAFP15056 766 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 PDE6AP16499 860 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 STIP1P31948 543 aaKnown RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 GTF2H1P32780 548 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ADD2P35612 726 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 POLR2FP61218 127 aaKnown RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 RELAQ04206 551 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ITGA9Q13797 1035 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 MPP2Q14168 576 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ASTE1Q2TB18 679 aaPredicted RBP10.35□□□□□ -0.75
CLDN2-202ENST00000540876 TMEM67Q5HYA8 995 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 CCDC25Q86WR0 208 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 NELFCDQ8IXH7 590 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 SLC7A5P1Q8MH63 180 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 TTLL6Q8N841 843 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 GRAMD1AQ96CP6 724 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 EBF3Q9H4W6 596 aa10.35□□□□□ -0.75
CLDN2-202ENST00000540876 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms