RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TMEM134Q9H6X4 195 aa23.08■■□□□ 1.29
CHFR-217ENST00000540537 RXFP1Q9HBX9 757 aa23.08■■□□□ 1.29
CHFR-217ENST00000540537 CHST7Q9NS84 486 aa23.08■■□□□ 1.29
CHFR-217ENST00000540537 TNFSF13BQ9Y275 285 aa23.08■■□□□ 1.29
CHFR-217ENST00000540537 CCDC169A6NNP5 214 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 PTGESO14684 152 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 THP07101 528 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 HSP90AA2PQ14568 343 aaPredicted RBP23.07■■□□□ 1.28
CHFR-217ENST00000540537 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
CHFR-217ENST00000540537 ATAT1Q5SQI0 421 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 BRAPQ7Z569 592 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 PNMA5Q96PV4 448 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 GPR62Q9BZJ7 368 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 ARHGAP28Q9P2N2 729 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 RBM19Q9Y4C8 960 aaKnown RBP23.07■■□□□ 1.28
CHFR-217ENST00000540537 MYH11P35749 1972 aa23.07■■□□□ 1.28
CHFR-217ENST00000540537 TEX28O15482 410 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 SLC26A4O43511 780 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 BMP15O95972 392 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 ZXDAP98168 799 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 USP41Q3LFD5 358 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 AK8Q96MA6 479 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 KMT5AQ9NQR1 393 aa23.06■■□□□ 1.28
CHFR-217ENST00000540537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.06■■□□□ 1.28
CHFR-217ENST00000540537 TRIP11Q15643 1979 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 SPDYE4A6NLX3 237 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 TADA2AO75478 443 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 NAB2Q15742 525 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 TMEM119Q4V9L6 283 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 KANK3Q6NY19 840 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 SYT2Q8N9I0 419 aaPredicted RBP23.05■■□□□ 1.28
CHFR-217ENST00000540537 CDK5RAP3Q96JB5 506 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 ACO2Q99798 780 aaKnown RBP23.05■■□□□ 1.28
CHFR-217ENST00000540537 MRPL4Q9BYD3 311 aaKnown RBP23.05■■□□□ 1.28
CHFR-217ENST00000540537 KCND2Q9NZV8 630 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 DPP7Q9UHL4 492 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 KCNG1Q9UIX4 513 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 GDAQ9Y2T3 454 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 SF3B1O75533 1304 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHFR-217ENST00000540537 PLXNA3P51805 1871 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 DENND4AQ7Z401 1863 aa23.05■■□□□ 1.28
CHFR-217ENST00000540537 CASTOR2A6NHX0 329 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 C1RP00736 705 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 SP100P23497 879 aaPredicted RBP23.04■■□□□ 1.28
CHFR-217ENST00000540537 SLC12A3P55017 1021 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 CREMQ03060 361 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 PTPN21Q16825 1174 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 ELMSAN1Q6PJG2 1045 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 TMC5Q6UXY8 1006 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 TRIM67Q6ZTA4 783 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 TAS1R3Q7RTX0 852 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 GPR149Q86SP6 731 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 RABGGTAQ92696 567 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 PAAF1Q9BRP4 392 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 NTPCRQ9BSD7 190 aaKnown RBP23.04■■□□□ 1.28
CHFR-217ENST00000540537 CXCL16Q9H2A7 254 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 FNIP2Q9P278 1114 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 CACNG4Q9UBN1 327 aa23.04■■□□□ 1.28
CHFR-217ENST00000540537 C2CD4DB7Z1M9 353 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 GLUD1P00367 558 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 PDCP20941 246 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 C15orf39Q6ZRI6 1047 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 HFE2Q6ZVN8 426 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 CMASQ8NFW8 434 aaPredicted RBP23.03■■□□□ 1.28
CHFR-217ENST00000540537 SPIRE2Q8WWL2 714 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 PTPRHQ9HD43 1115 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 MAN1C1Q9NR34 630 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 USTQ9Y2C2 406 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 MYO10Q9HD67 2058 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 C2orf16Q68DN1 1984 aa23.03■■□□□ 1.28
CHFR-217ENST00000540537 ZNF318Q5VUA4 2279 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 MTCL1Q9Y4B5 1905 aaKnown RBP23.02■■□□□ 1.28
CHFR-217ENST00000540537 KIF4AO95239 1232 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 PLS3P13797 630 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 PLA2G5P39877 138 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 GRM5P41594 1212 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 ZNF568Q3ZCX4 644 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 TDRD5Q8NAT2 981 aaKnown RBP23.02■■□□□ 1.28
CHFR-217ENST00000540537 HDAC7Q8WUI4 952 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 RIN2Q8WYP3 895 aaPredicted RBP23.02■■□□□ 1.28
CHFR-217ENST00000540537 B3GALT6Q96L58 329 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 PLIN2Q99541 437 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 TARS2Q9BW92 718 aaKnown RBP23.02■■□□□ 1.28
CHFR-217ENST00000540537 CDT1Q9H211 546 aa23.02■■□□□ 1.28
CHFR-217ENST00000540537 TMEM221A6NGB7 291 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 SFI1A8K8P3 1242 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 M0R296 226 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 SLC16A4O15374 487 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 PROZP22891 400 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 SMTNP53814 917 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 SIGLEC14Q08ET2 396 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 RAD51AP2Q09MP3 1159 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 CYP26C1Q6V0L0 522 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 BMP8AQ7Z5Y6 402 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 MFSD14AQ96MC6 490 aa23.01■■□□□ 1.27
CHFR-217ENST00000540537 PPP1R10Q96QC0 940 aaKnown RBP23.01■■□□□ 1.27
CHFR-217ENST00000540537 CCDC94Q9BW85 323 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms