RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 N4BP3O15049 544 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 CFHP08603 1231 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 SPATA31D3P0C874 917 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 LAMP2P13473 410 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 FOXK2Q01167 660 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 ELAVL2Q12926 359 aaKnown RBP13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 ANGPT1Q15389 498 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 RTP2Q5QGT7 225 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 PHLDB3Q6NSJ2 640 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 SPATA31D4Q6ZUB0 917 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 FRMD5Q7Z6J6 570 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 RSAD2Q8WXG1 361 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 B3GALT6Q96L58 329 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 POLR3CQ9BUI4 534 aaPredicted RBP13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 KLK14Q9P0G3 267 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 FBXW11Q9UKB1 542 aa13.28□□□□□ -0.28
CBX3P4-202ENST00000540428 C2orf16Q68DN1 1984 aa13.27□□□□□ -0.28
CBX3P4-202ENST00000540428 KRBA1A5PL33 1030 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 PTGESO14684 152 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 LARGE1O95461 756 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 THP07101 528 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 HNRNPA1P09651 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 MYBP10242 640 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 RPL17P18621 184 aaKnown RBP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 MUTP22033 750 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 HOXA9P31269 272 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 ORC2Q13416 577 aaPredicted RBP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 MAPK6Q16659 721 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 MAEAQ7L5Y9 396 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 ERMNQ8TAM6 284 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 TMEM60Q9H2L4 133 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 SEMA4AQ9H3S1 761 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 PDZD7Q9H5P4 517 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 SLC2A4RGQ9NR83 387 aa13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
CBX3P4-202ENST00000540428 A0A087WWV3 80 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 ACKR2O00590 384 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 JAK2O60674 1132 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 MED24O75448 989 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 KIF4AO95239 1232 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 POU2F2P09086 479 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 CYP11B2P19099 503 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 RFX1P22670 979 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 RPA1P27694 616 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 NAMPTP43490 491 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 PRPF4BQ13523 1007 aaKnown RBP13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 HTR4Q13639 388 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 LIN9Q5TKA1 542 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 PRSS55Q6UWB4 352 aaPredicted RBP13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 GLYCTKQ8IVS8 523 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 RABGGTAQ92696 567 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 CLSTN3Q9BQT9 956 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 PAAF1Q9BRP4 392 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 SNTG2Q9NY99 539 aa13.26□□□□□ -0.29
CBX3P4-202ENST00000540428 CASTOR2A6NHX0 329 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 STK25O00506 426 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 RECQL4O94761 1208 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 PRKCBP05771 671 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 FSHRP23945 695 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 MCM7P33993 719 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 NAB2Q15742 525 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 PSMD5Q16401 504 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 FAM171A1Q5VUB5 890 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 RTL10Q7L3V2 364 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 GPR152Q8TDT2 470 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 BSNDQ8WZ55 320 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 TBC1D17Q9HA65 648 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 ARHGEF3Q9NR81 526 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 CACNG4Q9UBN1 327 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 CDH7Q9ULB5 785 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 NUMBLQ9Y6R0 609 aa13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
CBX3P4-202ENST00000540428 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 XYLBO75191 536 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 C8AP07357 584 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 OR52Z1P0C646 297 aa13.24□□□□□ -0.29
CBX3P4-202ENST00000540428 NEK4P51957 841 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms