RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 VAV2P52735 878 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 POLR2FP61218 127 aaKnown RBP12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 KIF5AQ12840 1032 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 DCAF17Q5H9S7 520 aaPredicted RBP12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 ABHD15Q6UXT9 468 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 SERINC5Q86VE9 423 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 SLC35C1Q96A29 364 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 JAKMIP2Q96AA8 810 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 CEP170P1Q96L14 293 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 GANQ9H2C0 597 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 NKX2-4Q9H2Z4 354 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
CYB561A3-215ENST00000540317 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 AKR1B10O60218 316 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 EXOC3O60645 756 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 NBNO60934 754 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 KRT13P13646 458 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 MYOGP15173 224 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 EIF4A3P38919 411 aaKnown RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 KIF11P52732 1056 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 DMP1Q13316 513 aaPredicted RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 GPNMBQ14956 572 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 FAM102BQ5T8I3 360 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 TCERG1LQ5VWI1 586 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 SWSAP1Q6NVH7 229 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 ANO5Q75V66 913 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 NAPGQ99747 312 aaPredicted RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 SMARCAD1Q9H4L7 1026 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 AZI2Q9H6S1 392 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 ERAP1Q9NZ08 941 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 PPME1Q9Y570 386 aa12.97□□□□□ -0.33
CYB561A3-215ENST00000540317 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 RBAK-RBAKDNI3L0D1 243 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 PON1P27169 355 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 CASP4P49662 377 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 NCBP1Q09161 790 aaKnown RBP12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 CETN1Q12798 172 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 ASIC2Q16515 512 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 KLHDC7AQ5VTJ3 777 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 PHOSPHO2Q8TCD6 241 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 SLC9A7Q96T83 725 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 CRACR2AQ9BSW2 395 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 IFIH1Q9BYX4 1025 aaKnown RBP12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 PRDM12Q9H4Q4 367 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 GUCA1BQ9UMX6 200 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 PCDHA11Q9Y5I1 949 aa12.96□□□□□ -0.33
CYB561A3-215ENST00000540317 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 IGSF9BQ9UPX0 1349 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 P4HA2O15460 535 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 STBD1O95210 358 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CXCL10P02778 98 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CTSHP09668 335 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 UCHL3P15374 230 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 RFX1P22670 979 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 HOXC8P31273 242 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CYP2J2P51589 502 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PEX3P56589 373 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PRKCEQ02156 737 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 ENPEPQ07075 957 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PPFIA1Q13136 1202 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 IKBKEQ14164 716 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 TDRD12Q587J7 1177 aaKnown RBP12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 C10orf76Q5T2E6 689 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PLA2G4FQ68DD2 849 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 MAEAQ7L5Y9 396 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CEP112Q8N8E3 955 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 KCNN1Q92952 543 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 SPAG5Q96R06 1193 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 ZBED2Q9BTP6 218 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 ATP6V0A4Q9HBG4 840 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CYP26B1Q9NR63 512 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 CDC23Q9UJX2 597 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 PCDHA13Q9Y5I0 950 aa12.95□□□□□ -0.34
CYB561A3-215ENST00000540317 MAFBQ9Y5Q3 323 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms