RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PARVGQ9HBI0 331 aa16.55■□□□□ 0.24
UBE3B-212ENST00000540230 FAN1Q9Y2M0 1017 aa16.55■□□□□ 0.24
UBE3B-212ENST00000540230 ALDH2P05091 517 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 SMTNP53814 917 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 OSTNP61366 133 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 GRIK3Q13003 919 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 NAB2Q15742 525 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 DUSP6Q16828 381 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-212ENST00000540230 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 DDX53Q86TM3 631 aaKnown RBP16.54■□□□□ 0.24
UBE3B-212ENST00000540230 EFHBQ8N7U6 833 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 RPS6KC1Q96S38 1066 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 HAPLN2Q9GZV7 340 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 CLEC1BQ9P126 229 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 BARX2Q9UMQ3 279 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-212ENST00000540230 ZMYM2Q9UBW7 1377 aa16.54■□□□□ 0.24
UBE3B-212ENST00000540230 C2orf71A6NGG8 1288 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 K7ENM7 598 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 MEFVO15553 781 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-212ENST00000540230 TRAK2O60296 914 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 HARSP12081 509 aaKnown RBP16.53■□□□□ 0.24
UBE3B-212ENST00000540230 IL9P15248 144 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 NMT1P30419 496 aaKnown RBP16.53■□□□□ 0.24
UBE3B-212ENST00000540230 STAT6P42226 847 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 SEZ6Q53EL9 994 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 GLRA4Q5JXX5 417 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
UBE3B-212ENST00000540230 MPZL3Q6UWV2 235 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 DDX12PQ92771 950 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 PPP2R3CQ969Q6 453 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 DNAJC19Q96DA6 116 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 NGRNQ9NPE2 291 aaKnown RBP16.53■□□□□ 0.24
UBE3B-212ENST00000540230 ANKFY1Q9P2R3 1169 aa16.53■□□□□ 0.24
UBE3B-212ENST00000540230 CASTOR2A6NHX0 329 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 CUTAO60888 179 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 TBCAO75347 108 aaKnown RBP16.52■□□□□ 0.24
UBE3B-212ENST00000540230 EFEMP2O95967 443 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 CTSAP10619 480 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 GRM5P41594 1212 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 NDUFV1P49821 464 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 STRN3Q13033 797 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 KCNC3Q14003 757 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.24
UBE3B-212ENST00000540230 E2F4Q16254 413 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 TAS1R1Q7RTX1 841 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 MRPL43Q8N983 215 aaKnown RBP16.52■□□□□ 0.24
UBE3B-212ENST00000540230 STAMQ92783 540 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 KCNN1Q92952 543 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
UBE3B-212ENST00000540230 CITO14578 2027 aa16.52■□□□□ 0.23
UBE3B-212ENST00000540230 TCHHQ07283 1943 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 NCK2O43639 380 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 TOM1L1O75674 476 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 CXCL14O95715 111 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-212ENST00000540230 CA8P35219 290 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 ZC2HC1CQ53FD0 456 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-212ENST00000540230 PTCRAQ6ISU1 281 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-212ENST00000540230 SFR1Q86XK3 245 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 RNF168Q8IYW5 571 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-212ENST00000540230 KCNG4Q8TDN1 519 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 UHRF1Q96T88 793 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-212ENST00000540230 TCHPQ9BT92 498 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 IKZF4Q9H2S9 585 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
UBE3B-212ENST00000540230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 CARNS1A5YM72 827 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 GRXCR2A6NFK2 248 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 THP07101 528 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 MCF2P10911 925 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 TUSC3Q13454 348 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 PTPN14Q15678 1187 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 LLGL2Q6P1M3 1020 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 FAM178BQ8IXR5 827 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 KCNG1Q9UIX4 513 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 ME1P48163 572 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 GTF2BQ00403 316 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 MCL1Q07820 350 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 ATL3Q6DD88 541 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 ALKAL1Q6UXT8 129 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 DHX58Q96C10 678 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 BICD1Q96G01 975 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 SNX27Q96L92 541 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 ZMAT2Q96NC0 199 aaKnown RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 CDCA3Q99618 268 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 CCDC94Q9BW85 323 aaPredicted RBP16.5■□□□□ 0.23
UBE3B-212ENST00000540230 FGFBP2Q9BYJ0 223 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 GPR62Q9BZJ7 368 aa16.5■□□□□ 0.23
UBE3B-212ENST00000540230 GOLGA2P5Q9HBQ8 144 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms