RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 IQUBQ8NA54 791 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 ATXN2LQ8WWM7 1075 aaKnown RBP20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 RABGGTAQ92696 567 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 TMEM169Q96HH4 297 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 RPS6KC1Q96S38 1066 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 TCF25Q9BQ70 676 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 IKZF4Q9H2S9 585 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 IGFLR1Q9H665 355 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 UBE2ZQ9H832 354 aaPredicted RBP20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 MARCH5Q9NX47 278 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 TBC1D7Q9P0N9 293 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 ANKFY1Q9P2R3 1169 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 COG5Q9UP83 839 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 PRG3Q9Y2Y8 225 aaPredicted RBP20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 VCANP13611 3396 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 FRMD3A2A2Y4 597 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 HIDE1A8MVS5 230 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 PER2O15055 1255 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 LINC01565O15544 149 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 HARSP12081 509 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 IDEP14735 1019 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 OR1G1P47890 313 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 SLC39A4Q6P5W5 647 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 DDX53Q86TM3 631 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 VPS52Q8N1B4 723 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 PABPC5Q96DU9 382 aaKnown RBP20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 PAAF1Q9BRP4 392 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 STRA6Q9BX79 667 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 FGFBP2Q9BYJ0 223 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 TNMDQ9H2S6 317 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 CUEDC2Q9H467 287 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 ST6GALNAC4Q9H4F1 302 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 GDPD2Q9HCC8 539 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 FAM13BQ9NYF5 915 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 ATP6V1DQ9Y5K8 247 aa20.04■□□□□ 0.8
SNRPA1-203ENST00000540017 TISP43B9A030 160 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 PPP1R37O75864 691 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 PIGRP01833 764 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 GAP43P17677 238 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 LTBRP36941 435 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 NRIP1P48552 1158 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 KCNQ1P51787 676 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 CASP5P51878 434 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 MRPS5P82675 430 aaKnown RBP20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 MCL1Q07820 350 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 CTC1Q2NKJ3 1217 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 GLRA4Q5JXX5 417 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 ADALQ6DHV7 355 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 ALKAL1Q6UXT8 129 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 TMC7Q7Z402 723 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 APBB1IPQ7Z5R6 666 aaPredicted RBP20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 MAP4K3Q8IVH8 894 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 AUTS2Q8WXX7 1259 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 BICD1Q96G01 975 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 ASB2Q96Q27 587 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 ZBP1Q9H171 429 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 ENTPD7Q9NQZ7 604 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 PANK4Q9NVE7 773 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 SEL1LQ9UBV2 794 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 KCNH3Q9ULD8 1083 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 BRWD1Q9NSI6 2320 aa20.03■□□□□ 0.8
SNRPA1-203ENST00000540017 A0A1B0GVL5 298 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CLDN3O15551 220 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 EFEMP2O95967 443 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 THP07101 528 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 SCP2P22307 547 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 KCNA5P22460 613 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CMA1P23946 247 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CASP1P29466 404 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 LIG4P49917 911 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 NUCB2P80303 420 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 RBM10P98175 930 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 DLX2Q07687 328 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 KCNA1Q09470 495 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 ADAM15Q13444 863 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 XKR4Q5GH76 650 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 HERC4Q5GLZ8 1057 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 PDE12Q6L8Q7 609 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 TAS1R1Q7RTX1 841 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CCDC94Q9BW85 323 aaPredicted RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 TLE6Q9H808 572 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 MRPL44Q9H9J2 332 aaKnown RBP20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CLDND1Q9NY35 253 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 TRIP11Q15643 1979 aa20.02■□□□□ 0.8
SNRPA1-203ENST00000540017 CARNS1A5YM72 827 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 CASTOR2A6NHX0 329 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 HNRNPDLO14979 420 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 MYBP10242 640 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 PFKFB1P16118 471 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 IGFBP6P24592 240 aaPredicted RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 COASYQ13057 564 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 TUSC3Q13454 348 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 EP400NLQ6ZTU2 488 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 GRAMD1CQ8IYS0 662 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 MRPL43Q8N983 215 aaKnown RBP20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 VN1R2Q8NFZ6 395 aa20.01■□□□□ 0.79
SNRPA1-203ENST00000540017 HPS3Q969F9 1004 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms