RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 C2CD2LO14523 706 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 LRP3O75074 770 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 MAFO75444 373 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RFPL2O75678 378 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 GSPT1P15170 499 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RXRAP19793 462 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CHMLP26374 656 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 GNA11P29992 359 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RPS9P46781 194 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 GLUD2P49448 558 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 USP11P51784 963 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 JAK3P52333 1124 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 DSG1Q02413 1049 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CREMQ03060 361 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 NCBP1Q09161 790 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 HTR4Q13639 388 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 PPP2R5DQ14738 602 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 MLF2Q15773 248 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 USP41Q3LFD5 358 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 LONRF3Q496Y0 759 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 XKR3Q5GH77 459 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 JAKMIP3Q5VZ66 844 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 LILRA6Q6PI73 481 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 POTEGQ6S5H5 508 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 AGMOQ6ZNB7 445 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 SRGAP1Q7Z6B7 1085 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CELF5Q8N6W0 485 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RDM1Q8NG50 284 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CCDC12Q8WUD4 166 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 BCL7CQ8WUZ0 217 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CRYGNQ8WXF5 182 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 DDX1Q92499 740 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CLDN23Q96B33 292 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF707Q96C28 371 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 PKNOX2Q96KN3 472 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 HERC2P3Q9BVR0 1158 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 FOXQ1Q9C009 403 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 IL25Q9H293 177 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 EPC1Q9H2F5 836 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 TSPY26PQ9H489 355 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RSAD1Q9HA92 442 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 C6orf50Q9HD87 102 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CHST7Q9NS84 486 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 SUCLA2Q9P2R7 463 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 CDH7Q9ULB5 785 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 RAB23Q9ULC3 237 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 PIN4Q9Y237 131 aaKnown RBP6.65□□□□□ -1.34
CPSF7-219ENST00000539952 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
CPSF7-219ENST00000539952 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.35
CPSF7-219ENST00000539952 ZNF292O60281 2723 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 GPR179Q6PRD1 2367 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ARHGAP33O14559 1287 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SLC30A4O14863 429 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SGSM2O43147 1006 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ASAP2O43150 1006 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 TGM5O43548 720 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ZNF862O60290 1169 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 CD2BP2O95400 341 aaKnown RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 EFEMP2O95967 443 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 POMCP01189 267 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 HNRNPA1P09651 372 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SPATA31D3P0C874 917 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 TGM1P22735 817 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 FSHRP23945 695 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 OR1G1P47890 313 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 UBXN2BQ14CS0 331 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ACAP1Q15027 740 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 PCBP1Q15365 356 aaKnown RBP eCLIP6.64□□□□□ -1.351e-15■■■■■ 80.2
CPSF7-219ENST00000539952 PRR16Q569H4 304 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ZNF852Q6ZMS4 543 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SPATA31D4Q6ZUB0 917 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RTL10Q7L3V2 364 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 TAS1R1Q7RTX1 841 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 PALB2Q86YC2 1186 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RHPN2Q8IUC4 686 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 COLGALT2Q8IYK4 626 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RNF168Q8IYW5 571 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 NETO1Q8TDF5 533 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ZMYND15Q9H091 742 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 ZMYND12Q9H0C1 365 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RBSNQ9H1K0 784 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 LTB4R2Q9NPC1 389 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 FAM217BQ9NTX9 383 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 RBM8AQ9Y5S9 174 aaKnown RBP6.64□□□□□ -1.35
CPSF7-219ENST00000539952 TAF6LQ9Y6J9 622 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 SPTBN2O15020 2390 aa6.64□□□□□ -1.35
CPSF7-219ENST00000539952 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 GOLGA6L6A8MZA4 724 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 DKC1O60832 514 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 LRRN2O75325 713 aa6.63□□□□□ -1.35
CPSF7-219ENST00000539952 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
CPSF7-219ENST00000539952 RETP07949 1114 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms