RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NIPA1Q7RTP0 329 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 PLEKHM2Q8IWE5 1019 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 EXOC6Q8TAG9 804 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 CCDC51Q96ER9 411 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 KIF2CQ99661 725 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 FAM126AQ9BYI3 521 aaPredicted RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 DNAI2Q9GZS0 605 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 KDM4CQ9H3R0 1056 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 NRDE2Q9H7Z3 1164 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 KDM3AQ9Y4C1 1321 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 PKD1L2Q7Z442 2459 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 MBLAC1A4D2B0 266 aaPredicted RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 CASTOR2A6NHX0 329 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 NRP1O14786 923 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 CCNT1O60563 726 aaKnown RBP8.34□□□□□ -1.07
GNE-205ENST00000539815 RFPL2O75678 378 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 NBL1P41271 181 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 CCDC173Q0VFZ6 552 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 TROAPQ12815 778 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SLFN12Q8IYM2 578 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 KXD1Q9BQD3 176 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 BCAS3Q9H6U6 928 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 LMAN1LQ9HAT1 526 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 SLC38A7Q9NVC3 462 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 ZDHHC7Q9NXF8 308 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 VPS54Q9P1Q0 977 aa8.34□□□□□ -1.07
GNE-205ENST00000539815 GOLGA6CA6NDK9 693 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 GOLGA6BA6NDN3 693 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 NPTXRO95502 500 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 GOLGA6DP0CG33 693 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 CD72P21854 359 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PAX7P23759 505 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 AVPR1AP37288 418 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 MLH1P40692 756 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 NOVA1P51513 510 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 GPC3P51654 580 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 TTC22Q5TAA0 569 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 CREB3L3Q68CJ9 461 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 LRSAM1Q6UWE0 723 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 SRBD1Q8N5C6 995 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 MCPH1Q8NEM0 835 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 NETO1Q8TDF5 533 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 TBCKQ8TEA7 893 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 LY9Q9HBG7 655 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 GOLGA6AQ9NYA3 693 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PCDHA12Q9UN75 941 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 BAZ2AQ9UIF9 1905 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 MEIS1O00470 390 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 N4BP3O15049 544 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 CDC45O75419 566 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 HNRNPA1P09651 372 aaKnown RBP eCLIP8.33□□□□□ -1.08
GNE-205ENST00000539815 FGRP09769 529 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 GPC5P78333 572 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 FOXC1Q12948 553 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PRPF4BQ13523 1007 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 E2F4Q16254 413 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 ZNF280DQ6N043 979 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PPP1R12AO14974 1030 aaPredicted RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 GCFC2P16383 781 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 HNRNPH2P55795 449 aaKnown RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 OSTNP61366 133 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PLD1Q13393 1074 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 TERF2Q15554 542 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 CTXN3Q4LDR2 81 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 RGL4Q8IZJ4 473 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 GPR88Q9GZN0 384 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 PRMT7Q9NVM4 692 aaPredicted RBP8.33□□□□□ -1.08
GNE-205ENST00000539815 ADAM28Q9UKQ2 775 aa8.33□□□□□ -1.08
GNE-205ENST00000539815 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 TRIM66O15016 1216 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 AXIN1O15169 862 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 RGS20O76081 388 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ALDH1A2O94788 518 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 CHMLP26374 656 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 SREBF1P36956 1147 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 IFNAR2P48551 515 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 CREB5Q02930 508 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 HIC1Q14526 733 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 TTC19Q6DKK2 380 aaPredicted RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 SLC44A3Q8N4M1 653 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 PRPF31Q8WWY3 499 aaKnown RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 FAM3CQ92520 227 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 WDR6Q9NNW5 1121 aaKnown RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 NUMBLQ9Y6R0 609 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 TEX28O15482 410 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ECEL1O95672 775 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 RPL17P18621 184 aaKnown RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 TXKP42681 527 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 USP11P51784 963 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 HAUS3Q68CZ6 603 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms