RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RTP2Q5QGT7 225 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 PARM1Q6UWI2 310 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 ERMP1Q7Z2K6 904 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 NOSTRINQ8IVI9 506 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 EXOC8Q8IYI6 725 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 MAML2Q8IZL2 1156 aaPredicted RBP16.58■□□□□ 0.24
USB1-203ENST00000539737 GSTCDQ8NEC7 633 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 SLC7A3Q8WY07 619 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 FGF14Q92915 247 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 INTS4Q96HW7 963 aaKnown RBP16.58■□□□□ 0.24
USB1-203ENST00000539737 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 RXFP1Q9HBX9 757 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 WNT16Q9UBV4 365 aa16.58■□□□□ 0.24
USB1-203ENST00000539737 FANCMQ8IYD8 2048 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 CNTNAP2Q9UHC6 1331 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 H3BQV1 296 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 TBX3O15119 743 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 NPTXRO95502 500 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 LAMP2P13473 410 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 CD72P21854 359 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 YWHABP31946 246 aaKnown RBP16.57■□□□□ 0.24
USB1-203ENST00000539737 GPC5P78333 572 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 DSG1Q02413 1049 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 AMHR2Q16671 573 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 FUT10Q6P4F1 479 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 SRGAP1Q7Z6B7 1085 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 GRASPQ7Z6J2 395 aaPredicted RBP16.57■□□□□ 0.24
USB1-203ENST00000539737 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
USB1-203ENST00000539737 EPG5Q9HCE0 2579 aa16.57■□□□□ 0.24
USB1-203ENST00000539737 TPRP12270 2363 aaKnown RBP16.57■□□□□ 0.24
USB1-203ENST00000539737 CACNA1BQ00975 2339 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 CCL16O15467 120 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 ERLIN2O94905 339 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 PDCP20941 246 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 TRAPPC10P48553 1259 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 PPP2R5CQ13362 524 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
USB1-203ENST00000539737 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
USB1-203ENST00000539737 CAPSQ13938 189 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 DCLRE1AQ6PJP8 1040 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 DGLUCYQ7Z3D6 616 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 CHST7Q9NS84 486 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 SIT1Q9Y3P8 196 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
USB1-203ENST00000539737 CASTOR2A6NHX0 329 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 WNT7AO00755 349 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 NEMFO60524 1076 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 ARF4P18085 180 aaPredicted RBP16.55■□□□□ 0.24
USB1-203ENST00000539737 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.24
USB1-203ENST00000539737 MBTD1Q05BQ5 628 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 POTEHQ6S545 545 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 SLFN12Q8IYM2 578 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 ITFG1Q8TB96 612 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 KXD1Q9BQD3 176 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 GPRC5CQ9NQ84 441 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 KANSL3Q9P2N6 904 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 VWA8A3KMH1 1905 aa16.55■□□□□ 0.24
USB1-203ENST00000539737 NOTCH4Q99466 2003 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 ANHXE9PGG2 379 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 P4HBP07237 508 aaKnown RBP16.54■□□□□ 0.24
USB1-203ENST00000539737 FSHRP23945 695 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 PTENP60484 403 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 SPIRE1Q08AE8 756 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 CALCRLQ16602 461 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 LARP1BQ659C4 914 aaKnown RBP16.54■□□□□ 0.24
USB1-203ENST00000539737 LILRA6Q6PI73 481 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 TSSK4Q6SA08 328 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 C1orf210Q8IVY1 113 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 PJA1Q8NG27 643 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 STAMQ92783 540 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 MTRQ99707 1265 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 CSRNP2Q9H175 543 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 PARP2Q9UGN5 583 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 POLIQ9UNA4 740 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 PPME1Q9Y570 386 aa16.54■□□□□ 0.24
USB1-203ENST00000539737 KIF4AO95239 1232 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 GLRA2P23416 452 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 RFC5P40937 340 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 MCTP1Q6DN14 999 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 OTUD6AQ7L8S5 288 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
USB1-203ENST00000539737 PATJQ8NI35 1801 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 ZMYND10O75800 440 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 KRT37O76014 449 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 EDN1P05305 212 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 ATP2B1P20020 1258 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 EPHA7Q15375 998 aa16.52■□□□□ 0.24
USB1-203ENST00000539737 RSPO4Q2I0M5 234 aaPredicted RBP16.52■□□□□ 0.24
USB1-203ENST00000539737 TTC38Q5R3I4 469 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms