RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CALR3Q96L12 384 aaKnown RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 IP6K2Q9UHH9 426 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 TTI1O43156 1089 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 TBXAS1P24557 533 aaPredicted RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 KRT17Q04695 432 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 PIP4K2CQ8TBX8 421 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 TTC25Q96NG3 672 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 KRT38O76015 456 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 UCHL3P15374 230 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 GALCP54803 685 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 BZW1Q7L1Q6 419 aaKnown RBP15.43■□□□□ 0.06
CACNB1-206ENST00000539338 SLC35G2Q8TBE7 412 aa15.43■□□□□ 0.06
CACNB1-206ENST00000539338 ENTPD3O75355 529 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 MYBP10242 640 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 SF3B3Q15393 1217 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 GRAMD1BQ3KR37 738 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 WDR75Q8IWA0 830 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 SLC30A5Q8TAD4 765 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 RBM12Q9NTZ6 932 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 DPP7Q9UHL4 492 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 ATP11BQ9Y2G3 1177 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 NR1H3Q13133 447 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 KLHL38Q2WGJ6 581 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 VPS11Q9H270 941 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 HMX1Q9NP08 348 aaPredicted RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 KLHL11Q9NVR0 708 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 PFASO15067 1338 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 GYS1P13807 737 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 RASA1P20936 1047 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 XPAP23025 273 aaPredicted RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 AGO2Q9UKV8 859 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 FHOD1Q9Y613 1164 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 ANXA13P27216 316 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 YWHABP31946 246 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 POLE2P56282 527 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 DHX34Q14147 1143 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 NOA1Q8NC60 698 aaKnown RBP15.42■□□□□ 0.06
CACNB1-206ENST00000539338 KCNV2Q8TDN2 545 aa15.42■□□□□ 0.06
CACNB1-206ENST00000539338 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 GNGT2O14610 69 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SLC9A1P19634 815 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 PHKA2P46019 1235 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SH3BGRP55822 239 aaPredicted RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 HSP90AA5PQ58FG0 334 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 CCNI2Q6ZMN8 369 aaPredicted RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 TRIM67Q6ZTA4 783 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 TUFT1Q9NNX1 390 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SSU72P8A0A1W2PR75 194 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 MSCO60682 206 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 STAG3L1P0CL83 205 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 KRT10P13645 584 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SDC4P31431 198 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 COG2Q14746 738 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SAMD7Q7Z3H4 446 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 ADAM33Q9BZ11 813 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 MID2Q9UJV3 735 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 CHUKO15111 745 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SCP2P22307 547 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 LRRC37BQ96QE4 947 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 CACYBPQ9HB71 228 aaKnown RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 CREB3O43889 395 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 RTN2O75298 545 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 TMTC4Q5T4D3 741 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 GANCQ8TET4 914 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 EFHD1Q9BUP0 239 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SMYD3Q9H7B4 428 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 APEX2Q9UBZ4 518 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 PCDHA10Q9Y5I2 948 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
CACNB1-206ENST00000539338 NDUFB10O96000 172 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 PDHBP11177 359 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 HMGCS2P54868 508 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 NYAP1Q6ZVC0 841 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 HSPBP1Q9NZL4 362 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 LMCD1Q9NZU5 365 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 GGT7Q9UJ14 662 aa15.41■□□□□ 0.06
CACNB1-206ENST00000539338 ADGRB1O14514 1584 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 KIDINS220Q9ULH0 1771 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 MYBL1P10243 752 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 OCRLQ01968 901 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 TNFAIP2Q03169 654 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 FSTL1Q12841 308 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 OR2W6PQ8NHA6 318 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 FAM217BQ9NTX9 383 aaPredicted RBP15.4■□□□□ 0.06
CACNB1-206ENST00000539338 PIK3C2BO00750 1634 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 RPLP2P05387 115 aaKnown RBP15.4■□□□□ 0.06
CACNB1-206ENST00000539338 PMLP29590 882 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 FMO5P49326 533 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 ZC2HC1CQ53FD0 456 aaPredicted RBP15.4■□□□□ 0.06
CACNB1-206ENST00000539338 TAF1BQ53T94 588 aaPredicted RBP15.4■□□□□ 0.06
CACNB1-206ENST00000539338 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 APOBEC2Q9Y235 224 aaKnown RBP15.4■□□□□ 0.06
CACNB1-206ENST00000539338 CEMIPQ8WUJ3 1361 aa15.4■□□□□ 0.06
CACNB1-206ENST00000539338 HAUS5O94927 633 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms