RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 ADRB2P07550 413 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 HSPA1AP0DMV8 641 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 HSPA1BP0DMV9 641 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 PON1P27169 355 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 ACTN2P35609 894 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 FMO5P49326 533 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 MXD4Q14582 209 aaPredicted RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 KCNA10Q16322 511 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 DCAF17Q5H9S7 520 aaPredicted RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 KLHDC7AQ5VTJ3 777 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 EFCAB12Q6NXP0 572 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 MTHFD1LQ6UB35 978 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 GBP6Q6ZN66 633 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 ZNF662Q6ZS27 426 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 RSRC2Q7L4I2 434 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 CTU1Q7Z7A3 348 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 RNF180Q86T96 592 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 CCDC170Q8IYT3 715 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 METTL13Q8N6R0 699 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 PLEKHO2Q8TD55 490 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 PPP1R13LQ8WUF5 828 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 PCMTD1Q96MG8 357 aaPredicted RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 UNC93B1Q9H1C4 597 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 LRRC53A6NM62 1247 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 MYO1CO00159 1063 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 TRIM66O15016 1216 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 N4BP1O75113 896 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 NDUFA10O95299 355 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 LCA5LO95447 670 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EDN1P05305 212 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CCDC175P0C221 793 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CTCFP49711 727 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 CLCN3P51790 818 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EFNA5P52803 228 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 JAM2P57087 298 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 C7orf31Q8N865 590 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 ZSWIM2Q8NEG5 633 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 LMO3Q8TAP4 145 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 PSPC1Q8WXF1 523 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 MFSD14AQ96MC6 490 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CRACR2AQ9BSW2 395 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CARD6Q9BX69 1037 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 NFKBIZQ9BYH8 718 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 PCIF1Q9H4Z3 704 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 PAK6Q9NQU5 681 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 AIPL1Q9NZN9 384 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 GCNT4Q9P109 453 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 SUCLA2Q9P2R7 463 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 REXO2Q9Y3B8 237 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 MRFAP1Q9Y605 127 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 TRIP11Q15643 1979 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 MKI67P46013 3256 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 SSU72P8A0A1W2PR75 194 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 MBLAC1A4D2B0 266 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 LRRIQ4A6NIV6 560 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 HNRNPDLO14979 420 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 GJB1P08034 283 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 TRIM49P0CI25 452 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 TRIM49CP0CI26 452 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 KRT13P13646 458 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 UCHL3P15374 230 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 SLC9A1P19634 815 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 HOXC8P31273 242 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 VAMP7P51809 220 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 ACLYP53396 1101 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 ADAM17P78536 824 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 POU5F1BQ06416 359 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 LAMTOR4Q0VGL1 99 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 HIC1Q14526 733 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 MTFR1Q15390 333 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 SNRNP35Q16560 246 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 ASTE1Q2TB18 679 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 NBPF20Q3BBV1 942 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CBWD6Q4V339 395 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EPC2Q52LR7 807 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CBWD3Q5JTY5 395 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CBWD5Q5RIA9 395 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 HGSNATQ68CP4 663 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 NFRKBQ6P4R8 1299 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 FBXO46Q6PJ61 603 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 HDXQ7Z353 690 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 SRLQ86TD4 932 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 CEP112Q8N8E3 955 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 DEPTORQ8TB45 409 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 PARD3BQ8TEW8 1205 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 DESI2Q9BSY9 194 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 FAM107BQ9H098 131 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 ZNHIT6Q9NWK9 470 aaKnown RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 ARHGAP20Q9P2F6 1191 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 HDAC6Q9UBN7 1215 aa9.58□□□□□ -0.88
DDB1-213ENST00000539332 EPN1Q9Y6I3 576 aaPredicted RBP9.58□□□□□ -0.88
DDB1-213ENST00000539332 ABLIM1O14639 778 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms